Gene: AT5G04430 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G04430
Transcript Identifier
AT5G04430.2
Gene Type
Coding gene
Location
5 : 1250602-1253523 : negative

Family

Gene family
HOM03M002857
(30 genes in 15 species)
specific family
Subfamily
ORTHO03M000607
(13 genes in 11 species)
specific family

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Descriptions

Description
binding to TOMV RNA 1L (long form)
Curated Summary
Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.
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Identifiers

Identifier Name
aliasBINDING TO TOMV RNA 1
aliasbinding to TOMV RNA 1L (long form)
aliasBINDING TO TOMV RNA 1S (SHORT FORM)
aliasBTR1L
aliasBTR1
aliasBTR1S

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008380NASGene OntologyRNA splicing1
GO:0046719IMPGene Ontologyregulation by virus of viral protein levels in host cell1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676ISSGene Ontologynucleic acid binding1
GO:0003727IPIGene Ontologysingle-stranded RNA binding1
GO:0003723IEAInterProRNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004088K Homology domain, type 1
IPR004087K Homology domain

Mapman id Description
27.4RNA.RNA binding
No SignalP domains detected for this gene.