Gene: AT5G03650 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G03650
Transcript Identifier
AT5G03650.1
Gene Type
Coding gene
Location
5 : 931924-937470 : positive

Family

Gene family
HOM03M001139
(64 genes in 16 species)
specific family
Subfamily
ORTHO03M003861
(7 genes in 6 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
starch branching enzyme 2.2
Curated Summary
Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.
Show more...

Identifiers

Identifier Name
aliasstarch branching enzyme 2.2
aliasSBE2.2
uniprotQ9LZS3

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005982IMP, RCA, UniProtstarch metabolic process1 2 3 4 5 6 7 8 9 10 11 12
GO:0000023RCAGene Ontologymaltose metabolic process1
GO:0006098RCAGene Ontologypentose-phosphate shunt1
GO:0019252IEA, RCAUniProtstarch biosynthetic process1 2 3 4 5 6 7 8 9 10 11
GO:0019288RCAGene Ontologyisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1
GO:0019760RCAGene Ontologyglucosinolate metabolic process1
GO:0043085RCAGene Ontologypositive regulation of catalytic activity1
GO:0010021TASUniProtamylopectin biosynthetic process1 2 3 4 5 6 7 8 9 10 11
GO:0071332IEPUniProtcellular response to fructose stimulus1 2 3 4 5 6 7 8 9 10
GO:0071333IEPUniProtcellular response to glucose stimulus1 2 3 4 5 6 7 8 9 10
GO:0071482IEPUniProtcellular response to light stimulus1 2 3 4 5 6 7 8 9 10
GO:0071329IEPUniProtcellular response to sucrose stimulus1 2 3 4 5 6 7 8 9 10
GO:0005978IEAUniProtglycogen biosynthetic process1 2 3 4 5 6 7 8 9 10
GO:0005975IEAInterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003844IDA, ISS, UniProt1,4-alpha-glucan branching enzyme activity1 2 3 4 5 6 7 8 9 10 11 12
GO:0043169IEAUniProtcation binding1 2 3 4 5 6 7 8 9 10
GO:0004553IEAUniProthydrolase activity, hydrolyzing O-glycosyl compounds1 2 3 4 5 6 7 8 9 10
GO:0003824IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570IDAUniProtchloroplast stroma1 2 3 4 5 6 7 8 9 10 11
GO:0009507IDAGene Ontologychloroplast1
GO:0009501IEAUniProtamyloplast1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013780Glycosyl hydrolase, family 13, all-beta
IPR013781Glycoside hydrolase, catalytic domain
IPR006589Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR004193Glycoside hydrolase, family 13, N-terminal
IPR013783Immunoglobulin-like fold
IPR006048Alpha-amylase, C-terminal all beta
IPR014756Immunoglobulin E-set
IPR015902Glycoside hydrolase, family 13
IPR006047Glycosyl hydrolase, family 13, catalytic domain
IPR017853Glycoside hydrolase, superfamily

Mapman id Description
2.1.2.3major CHO metabolism.synthesis.starch.starch branching
No SignalP domains detected for this gene.