Gene: AT5G02310 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G02310
Transcript Identifier
AT5G02310.1
Gene Type
Coding gene
Location
5 : 474279-482552 : positive

Family

Gene family
HOM03M002931
(30 genes in 15 species)
specific family

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Descriptions

Description
proteolysis 6
Curated Summary
Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.
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Identifiers

Identifier Name
aliasproteolysis 6
aliasPRT6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IDAGene Ontologyubiquitin-dependent protein catabolic process1
GO:0006723IMPGene Ontologycuticle hydrocarbon biosynthetic process1
GO:0010025IMPGene Ontologywax biosynthetic process1
GO:0009737IMPGene Ontologyresponse to abscisic acid1
GO:0010029IMPGene Ontologyregulation of seed germination1
GO:0050994IMPGene Ontologyregulation of lipid catabolic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842IDA, IEAGene Ontologyubiquitin-protein ligase activity1
GO:0008270IEAInterProzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003126Zinc finger, N-recognin
IPR013993Zinc finger, N-recognin, metazoa

Mapman id Description
29.5.11protein.degradation.ubiquitin
No SignalP domains detected for this gene.