Gene: AT5G02190 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G02190
Transcript Identifier
AT5G02190.1
Gene Type
Coding gene
Location
5 : 435322-436683 : positive

Family

Gene family
HOM03M000031
(1041 genes in 16 species)
specific family
Subfamily
ORTHO03M009748
(4 genes in 4 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Eukaryotic aspartyl protease family protein
Curated Summary
encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage.
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Identifiers

Identifier Name
aliasEMBRYO DEFECTIVE 24
aliasARABIDOPSIS THALIANA ASPARTIC PROTEASE 38
aliasEMB24
aliasPROMOTION OF CELL SURVIVAL 1
aliasPCS1
aliasATASP38
uniprotQ9LZL3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793IMPGene Ontologyembryo development ending in seed dormancy1
GO:0012501IMPUniProtprogrammed cell death1 2 3
GO:0006508IEAUniProtproteolysis1 2
GO:0008152IEAPLAZA Homologymetabolic processHOM03M000031
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03M000031
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03M000031
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03M000031
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000031

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004190ISS, IEA, UniProtaspartic-type endopeptidase activity1 2 3
GO:0008233IDAGene Ontologypeptidase activity1
GO:0070011IEAPLAZA Homologypeptidase activity, acting on L-amino acid peptidesHOM03M000031
GO:0004175IEAPLAZA Homologyendopeptidase activityHOM03M000031
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000031
GO:0070001IEAPLAZA Homologyaspartic-type peptidase activityHOM03M000031
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000031

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0005783IDAUniProtendoplasmic reticulum1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR021109Aspartic peptidase domain
IPR001461Aspartic peptidase
IPR001969Aspartic peptidase, active site

Mapman id Description
27.3.99RNA.regulation of transcription.unclassified
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network