PLAZA 3.0 Monocots gene overview : AT4G38630

Gene: AT4G38630 (Arabidopsis thaliana)

Overview

Gene Identifier: AT4G38630
Transcript Identifier: AT4G38630.1
Gene Type: Coding gene
Location: 4 : 18057357-18059459 : negative

Family

Gene family: HOM03M002780
(31 genes in 16 species)
specific family

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Descriptions

Description: regulatory particle non-ATPase 10

Curated Summary: Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities

Identifiers

Identifier	Name
alias	ATMCB1
alias	MULTIUBIQUITIN-CHAIN-BINDING PROTEIN 1
alias	regulatory particle non-ATPase 10
alias	MBP1
alias	RPN10
alias	MULTIUBIQUITIN CHAIN BINDING PROTEIN 1
alias	MCB1
uniprot	P55034

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006511	RCA, TAS, IEA	Gene Ontology	ubiquitin-dependent protein catabolic process	1 2
GO:0030163	TAS	Gene Ontology	protein catabolic process	1
GO:0006974	IMP	UniProt	cellular response to DNA damage stimulus	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0009555	IMP	UniProt	pollen development	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0009651	IMP, RCA,	UniProt	response to salt stress	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0009733	IMP	UniProt	response to auxin	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0009735	IMP, IEP, RCA,	UniProt	response to cytokinin	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
GO:0009737	IMP	UniProt	response to abscisic acid	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0009744	IMP	UniProt	response to sucrose	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0010029	IMP	UniProt	regulation of seed germination	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0010150	IMP	UniProt	leaf senescence	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0048366	IMP	Gene Ontology	leaf development	1
GO:0048455	IMP	UniProt	stamen formation	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0048528	IMP	UniProt	post-embryonic root development	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0048767	IMP, RCA,	UniProt	root hair elongation	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0009408	IMP	UniProt	response to heat	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0043161	IMP, RCA,	UniProt	proteasome-mediated ubiquitin-dependent protein catabolic process	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0043248	IMP, RCA,	UniProt	proteasome assembly	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0051788	IMP, RCA,	UniProt	response to misfolded protein	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0080129	IMP, RCA	Gene Ontology	proteasome core complex assembly	1 2
GO:0006094	RCA	Gene Ontology	gluconeogenesis	1
GO:0006096	RCA	Gene Ontology	glycolysis	1
GO:0006623	RCA	Gene Ontology	protein targeting to vacuole	1
GO:0006635	RCA	Gene Ontology	fatty acid beta-oxidation	1
GO:0006833	RCA	Gene Ontology	water transport	1
GO:0006972	RCA	Gene Ontology	hyperosmotic response	1
GO:0007010	RCA	Gene Ontology	cytoskeleton organization	1
GO:0007030	RCA	Gene Ontology	Golgi organization	1
GO:0009266	RCA	Gene Ontology	response to temperature stimulus	1
GO:0009407	RCA	Gene Ontology	toxin catabolic process	1
GO:0009853	RCA	Gene Ontology	photorespiration	1
GO:0010498	RCA	Gene Ontology	proteasomal protein catabolic process	1
GO:0046686	RCA	Gene Ontology	response to cadmium ion	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0001653	IDA	UniProt	peptide receptor activity	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0031593	IDA	UniProt	polyubiquitin binding	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISM	Gene Ontology	cytoplasm	1
GO:0008540	IEA, IDA, ISS	UniProt	proteasome regulatory particle, base subcomplex	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0000502	IDA, TAS,	UniProt	proteasome complex	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0005634	TAS	UniProt	nucleus	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0016020	IDA	UniProt	membrane	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
GO:0005829	IDA	UniProt	cytosol	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002035	von Willebrand factor, type A
IPR003903	Ubiquitin interacting motif
IPR027040	Proteasome subunit Rpn10

Mapman id	Description
29.5.11	protein.degradation.ubiquitin

No SignalP domains detected for this gene.