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WorkbenchGene: AT4G36930 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT4G36930
- Transcript Identifier
- AT4G36930.1
- Gene Type
- Coding gene
- Location
- 4 : 17414167-17415945 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
- Curated Summary
-
Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.
Identifiers
| Identifier | Name |
|---|---|
| alias | SPATULA |
| alias | SPT |
| uniprot | Q9FUA4 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0009908 | NAS | Gene Ontology | flower development | 1 |
| GO:0009409 | IMP | UniProt | response to cold | 1 2 3 4 5 6 7 8 9 |
| GO:0010114 | IMP | UniProt | response to red light | 1 2 3 4 5 6 7 8 9 |
| GO:0010187 | IMP | UniProt | negative regulation of seed germination | 1 2 3 4 5 6 7 8 9 |
| GO:0010154 | IMP | UniProt | fruit development | 1 2 3 4 5 6 7 8 9 |
| GO:0048440 | IMP | UniProt | carpel development | 1 2 3 4 5 6 7 8 9 |
| GO:0007623 | IEP | UniProt | circadian rhythm | 1 2 3 4 5 6 7 8 9 |
| GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 3 4 5 6 7 8 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003677 | IEA, ISS | UniProt | DNA binding | 1 2 3 4 5 6 7 8 9 |
| GO:0003700 | ISS, TAS, | UniProt | sequence-specific DNA binding transcription factor activity | 1 2 3 4 5 6 7 8 9 10 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0046983 | IEA | InterPro | protein dimerization activity |
Cellular Component
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 27.3.6 | RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family |
No SignalP domains detected for this gene.