Gene: AT4G25530 (Arabidopsis thaliana)

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Gene Identifier
AT4G25530
Transcript Identifier
AT4G25530.1
Gene Type
Coding gene
Location
4 : 13039312-13042242 : positive

Family

Gene family
HOM03M000193
(259 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
FLOWERING WAGENINGEN
Curated Summary
Encodes a homeodomain-containing transcription factor that controls flowering. FWA is silenced in wild type plants and reverse of the imprinted silencing causes a late flowering phenotype. FWA gene contains two tandem repeats around the transcription start site that are necessary and sufficient for silencing via DNA methylation.
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Identifiers

Identifier Name
aliasHDG6
aliasHOMEODOMAIN GLABROUS 6
aliasFWA
aliasFLOWERING WAGENINGEN
uniprotQ9FVI6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, IEAGene Ontologyregulation of transcription, DNA-dependent1
GO:0006349IEPUniProtregulation of gene expression by genetic imprinting1 2 3 4 5 6 7
GO:0031047IMPUniProtgene silencing by RNA1 2 3 4 5 6 7
GO:0009909IEP, RCAGene Ontologyregulation of flower development1 2
GO:0007155RCAGene Ontologycell adhesion1
GO:0010090RCAGene Ontologytrichome morphogenesis1
GO:0045010RCAGene Ontologyactin nucleation1
GO:0048573RCAGene Ontologyphotoperiodism, flowering1
GO:0048765RCAGene Ontologyroot hair cell differentiation1
GO:0071555RCAGene Ontologycell wall organization1
GO:0009911IMPUniProtpositive regulation of flower development1 2 3 4 5 6 7
GO:0007275IEAUniProtmulticellular organismal development1 2 3 4 5 6
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000193

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7
GO:0005515IPIGene Ontologyprotein binding1
GO:0042803IPIGene Ontologyprotein homodimerization activity1
GO:0008289IEAUniProtlipid binding1 2 3 4 5 6
GO:0043565IEAUniProtsequence-specific DNA binding1 2 3 4 5 6

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMISS, UniProtnucleus1 2 3 4 5 6 7 8 9

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009057Homeodomain-like
IPR002913START domain
IPR001356Homeobox domain

Mapman id Description
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBHB
PlantTFDBHD-ZIP