Gene: AT4G25000 (Arabidopsis thaliana)

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Gene Identifier
AT4G25000
Transcript Identifier
AT4G25000.1
Gene Type
Coding gene
Location
4 : 12852109-12853825 : negative

Family

Gene family
HOM03M000562
(118 genes in 16 species)
specific family
Subfamily
ORTHO03M000629
(13 genes in 5 species)
specific family

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Descriptions

Description
alpha-amylase-like
Curated Summary
Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).
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Identifiers

Identifier Name
aliasalpha-amylase-like
aliasAMY1
aliasATAMY1
uniprotQ8VZ56

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009739IEPUniProtresponse to gibberellin stimulus1 2 3 4 5 6 7
GO:0009737IEPUniProtresponse to abscisic acid1 2 3 4 5 6 7
GO:0005975IEAUniProtcarbohydrate metabolic process1 2 3 4 5 6
GO:0005983ISOPLAZA Integrative Orthologystarch catabolic processOS02G52710 OS08G36910
GO:0005987ISOPLAZA Integrative Orthologysucrose catabolic processOS02G52710 OS08G36910

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004556IMP, ISSIEA, UniProtalpha-amylase activity1 2 3 4 5 6 7 8
GO:0005509IEAUniProtcalcium ion binding1 2 3 4 5 6
GO:0043169IEAInterProcation binding
GO:0003824IEAInterProcatalytic activity
GO:0016160IEAPLAZA Homologyamylase activityHOM03M000562

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISM, TASGene Ontologyextracellular region1 2
GO:0048046IDAUniProtapoplast1 2 3 4 5 6 7

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006046Alpha amylase
IPR013781Glycoside hydrolase, catalytic domain
IPR012850Alpha-amylase, C-terminal beta-sheet
IPR017853Glycoside hydrolase, superfamily
IPR015902Glycoside hydrolase, family 13
IPR006047Glycosyl hydrolase, family 13, catalytic domain
IPR013780Glycosyl hydrolase, family 13, all-beta
IPR006589Glycosyl hydrolase, family 13, subfamily, catalytic domain

Mapman id Description
2.2.2.1.1major CHO metabolism.degradation.starch.starch cleavage.alpha amylase
No SignalP domains detected for this gene.