Gene: AT4G24540 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G24540
Transcript Identifier
AT4G24540.1
Gene Type
Coding gene
Location
4 : 12671160-12673645 : negative

Family

Gene family
HOM03M000042
(909 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
AGAMOUS-like 24
Curated Summary
Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain.
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Identifiers

Identifier Name
aliasAGAMOUS-like 24
aliasAGL24
uniprotO82794

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010220IEPUniProtpositive regulation of vernalization response1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0048510IMPUniProtregulation of timing of transition from vegetative to reproductive phase1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0000060IDAUniProtprotein import into nucleus, translocation1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0010077IMP, IGIUniProtmaintenance of inflorescence meristem identity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0048438IGIUniProtfloral whorl development1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009739IEPUniProtresponse to gibberellin stimulus1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0045893IEPUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0010076IGIUniProtmaintenance of floral meristem identity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0010582IGIUniProtfloral meristem determinacy1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0048481RCAGene Ontologyovule development1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000042
GO:0010467IEAPLAZA Homologygene expressionHOM03M000042
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000042
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000042
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000042
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000042
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000042
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000042
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000042
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000042
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000042
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000042
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000042
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000042
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000042
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000042
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000042
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000042
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000042
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000042
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000042
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000042
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000042
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000042
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000042
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000042
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000042
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000042
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000042
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000042
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000042
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000042
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000042
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000042
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000042
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000042
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000042

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0005515IPIGene Ontologyprotein binding1
GO:0042803IPIGene Ontologyprotein homodimerization activity1
GO:0046982IPIGene Ontologyprotein heterodimerization activity1
GO:0043565IPIUniProtsequence-specific DNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0046983IEAInterProprotein dimerization activity
GO:0003677IEAInterProDNA binding
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000042
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000042
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000042
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000042

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMIEA, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0005737IDAUniProtcytoplasm1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03M000042
GO:0005622IEAPLAZA HomologyintracellularHOM03M000042
GO:0043226IEAPLAZA HomologyorganelleHOM03M000042
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03M000042
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03M000042
GO:0044464IEAPLAZA Homologycell partHOM03M000042
GO:0044424IEAPLAZA Homologyintracellular partHOM03M000042
GO:0005623IEAPLAZA HomologycellHOM03M000042

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002487Transcription factor, K-box
IPR002100Transcription factor, MADS-box

Mapman id Description
27.3.24RNA.regulation of transcription.MADS box transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMADS
PlantTFDBMIKC