Gene: AT4G16260 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G16260
Transcript Identifier
AT4G16260.1
Gene Type
Coding gene
Location
4 : 9200180-9201441 : negative

Family

Gene family
HOM03M000028
(1067 genes in 14 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
Glycosyl hydrolase superfamily protein
Curated Summary
Encodes a putative beta-1,3-endoglucanase that interacts with the 30C02 cyst nematode effector. May play a role in host defense.
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Identifiers

Identifier Name

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009651IEPGene Ontologyresponse to salt stress1
GO:0009817IDAGene Ontologydefense response to fungus, incompatible interaction1
GO:0002215IMPGene Ontologydefense response to nematode1
GO:0005975IEAInterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553ISS, IEAGene Ontologyhydrolase activity, hydrolyzing O-glycosyl compounds1
GO:0003824IEAInterProcatalytic activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000028
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03M000028

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618IDAGene Ontologycell wall1
GO:0005774IDAGene Ontologyvacuolar membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017853Glycoside hydrolase, superfamily
IPR013781Glycoside hydrolase, catalytic domain
IPR000490Glycoside hydrolase, family 17

Mapman id Description
26.4.1misc.beta 1,3 glucan hydrolases.glucan endo-1,3-beta-glucosidase
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network