Gene: AT4G15090 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G15090
Transcript Identifier
AT4G15090.1
Gene Type
Coding gene
Location
4 : 8614806-8617870 : positive

Family

Gene family
HOM03M000032
(887 genes in 13 species)
specific family
Subfamily
ORTHO03M013118
(3 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
FRS (FAR1 Related Sequences) transcription factor family
Curated Summary
Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3.
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Identifiers

Identifier Name
aliasFAR-RED IMPAIRED RESPONSE 1
aliasFAR1
uniprotQ9SWG3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009639IMPGene Ontologyresponse to red or far red light1
GO:0010017IMPGene Ontologyred or far-red light signaling pathway1
GO:0010018IMPUniProtfar-red light signaling pathway1 2 3 4 5 6 7 8 9
GO:0010218IMPGene Ontologyresponse to far red light1
GO:0045893IDA, RCA, UniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10
GO:0042753IMPUniProtpositive regulation of circadian rhythm1 2 3 4 5 6 7 8 9
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0000724RCAGene Ontologydouble-strand break repair via homologous recombination1
GO:0006396RCAGene OntologyRNA processing1
GO:0009410RCAGene Ontologyresponse to xenobiotic stimulus1
GO:0009630RCAGene Ontologygravitropism1
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0010212RCAGene Ontologyresponse to ionizing radiation1
GO:0010388RCAGene Ontologycullin deneddylation1
GO:0016567RCAGene Ontologyprotein ubiquitination1
GO:0016571RCAGene Ontologyhistone methylation1
GO:0016579RCAGene Ontologyprotein deubiquitination1
GO:0048522RCAGene Ontologypositive regulation of cellular process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPIGene Ontologyprotein binding1
GO:0003700IDAUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9
GO:0008270IEAUniProtzinc ion binding1 2 3 4 5 6 7 8

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9 10

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007527Zinc finger, SWIM-type
IPR006564Zinc finger, PMZ-type
IPR004330FAR1 DNA binding domain
IPR018289MULE transposase domain

Mapman id Description
30.11signalling.light
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBFAR1
PlantTFDBFAR1