PLAZA 3.0 Monocots gene overview : AT4G13400

Gene: AT4G13400 (Arabidopsis thaliana)

Overview

Gene Identifier: AT4G13400
Transcript Identifier: AT4G13400.1
Gene Type: Coding gene
Location: 4 : 7787822-7791149 : negative

Family

Gene family: HOM03M003980
(23 genes in 15 species)
specific family

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Descriptions

Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

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Identifiers

Identifier	Name

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	PLAZA Homology	oxidation-reduction process	HOM03M003980

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016706	IEA	PLAZA Homology	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	HOM03M003980

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	ISM	Gene Ontology	chloroplast	1

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Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR027443	Isopenicillin N synthase-like
IPR026992	Non-haem dioxygenase N-terminal domain

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.