Gene: AT4G12550 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G12550
Transcript Identifier
AT4G12550.1
Gene Type
Coding gene
Location
4 : 7439176-7439511 : positive

Family

Gene family
HOM03M000171
(282 genes in 13 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
Auxin-Induced in Root cultures 1
Curated Summary
isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.
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Identifiers

Identifier Name
aliasAIR1
aliasAuxin-Induced in Root cultures 1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006869ISSGene Ontologylipid transport1
GO:0009733IEPGene Ontologyresponse to auxin1
GO:0010102IEPGene Ontologylateral root morphogenesis1
GO:0009653RCAGene Ontologyanatomical structure morphogenesis1
GO:0048364RCAGene Ontologyroot development1
GO:0048527RCAGene Ontologylateral root development1
GO:0048589RCAGene Ontologydevelopmental growth1
GO:0048765RCAGene Ontologyroot hair cell differentiation1
GO:0048767RCAGene Ontologyroot hair elongation1
GO:0048869RCAGene Ontologycellular developmental process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008289ISSGene Ontologylipid binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR027923Hydrophobic seed protein

Mapman id Description
26.21misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network