PLAZA 3.0 Monocots gene overview : AT4G09550

Gene: AT4G09550 (Arabidopsis thaliana)

Overview

Gene Identifier: AT4G09550
Transcript Identifier: AT4G09550.1
Gene Type: Coding gene
Location: 4 : 6039706-6039921 : positive

Family

Gene family: HOM03M003817
(24 genes in 15 species)
specific family
Subfamily: ORTHO03M011504
(4 genes in 4 species)
specific family

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Descriptions

Description: AtGCP3 interacting protein 1

Curated Summary: Encodes a gamma-tubulin complex protein that plays a role in gamma-tubulin complex localization, spindle stability and chromosomal segregation.

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Identifiers

Identifier	Name
alias	ATGIP1
alias	GIP1a
alias	AtGCP3 interacting protein 1
alias	GCP3-Interacting Protein 1a
alias	ARABIDOPSIS ATGCP3 INTERACTING PROTEIN 1
alias	GIP1
uniprot	Q9M0N8

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0051418	IDA	UniProt	microtubule nucleation by microtubule organizing center	1 2 3 4
GO:0000226	IMP	Gene Ontology	microtubule cytoskeleton organization	1
GO:0007052	IMP	UniProt	mitotic spindle organization	1 2 3 4
GO:0006661	RCA	Gene Ontology	phosphatidylinositol biosynthetic process	1
GO:0007020	IEA	PLAZA Homology	microtubule nucleation	HOM03M003817

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IPI	Gene Ontology	protein binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005739	ISM	Gene Ontology	mitochondrion	1
GO:0008274	IPI	UniProt	gamma-tubulin ring complex	1 2 3 4
GO:0000930	IDA	Gene Ontology	gamma-tubulin complex	1
GO:0005635	IDA	UniProt	nuclear envelope	1 2 3 4
GO:0005828	IDA	UniProt	kinetochore microtubule	1 2 3 4
GO:0009524	IDA	UniProt	phragmoplast	1 2 3 4
GO:0009574	IDA	UniProt	preprophase band	1 2 3 4
GO:0072686	IDA	UniProt	mitotic spindle	1 2 3 4
GO:0005819	IEA	PLAZA Homology	spindle	HOM03M003817

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR022214	Protein of unknown function DUF3743

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.