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WorkbenchGene: AT4G08840 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT4G08840
- Transcript Identifier
- AT4G08840.1
- Gene Type
- Coding gene
- Location
- 4 : 5631298-5633779 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
pumilio 11
- Curated Summary
-
Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Identifiers
| Identifier | Name |
|---|---|
| alias | PUM11 |
| alias | pumilio 11 |
| alias | APUM11 |
| uniprot | Q9LDW3 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006417 | IEA | UniProt | regulation of translation | 1 2 3 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003723 | IEA, ISS | UniProt | RNA binding | 1 2 3 4 |
| GO:0005488 | IEA | InterPro | binding |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005737 | IEA, ISM | UniProt | cytoplasm | 1 2 3 4 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 35.1.12 | not assigned.no ontology.pumilio/Puf RNA-binding domain-containing protein |
No SignalP domains detected for this gene.