Gene: AT3G60600 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G60600
Transcript Identifier
AT3G60600.1
Gene Type
Coding gene
Location
3 : 22400537-22402408 : positive

Family

Gene family
HOM03M000428
(145 genes in 16 species)
specific family
Subfamily
ORTHO03M024333
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
vesicle associated protein
Curated Summary
Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.
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Identifiers

Identifier Name
aliasVAP27-1
aliasvesicle associated protein
aliasVAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1
aliasVAP27
aliasVAP
alias(AT)VAP
uniprotQ8VZ95

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046907TASUniProtintracellular transport1 2 3 4 5 6 7 8 9
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006499RCAGene OntologyN-terminal protein myristoylation1
GO:0006605RCAGene Ontologyprotein targeting1
GO:0006623RCAGene Ontologyprotein targeting to vacuole1
GO:0006886RCAGene Ontologyintracellular protein transport1
GO:0007030RCAGene OntologyGolgi organization1
GO:0007033RCAGene Ontologyvacuole organization1
GO:0010359RCAGene Ontologyregulation of anion channel activity1
GO:0016192RCAGene Ontologyvesicle-mediated transport1
GO:0019048IEAUniProtmodulation by virus of host morphology or physiology1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IPIGene Ontologyprotein binding1
GO:0005198IEAUniProtstructural molecule activity1 2 3 4 5 6 7 8

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9 10
GO:0005789IDAUniProtendoplasmic reticulum membrane1 2 3 4 5 6 7 8 9
GO:0000326IDAUniProtprotein storage vacuole1 2 3 4 5 6 7 8 9
GO:0016021IDAUniProtintegral to membrane1 2 3 4 5 6 7 8 9
GO:0005783IDAGene Ontologyendoplasmic reticulum1
GO:0005886IDAUniProtplasma membrane1 2 3 4 5 6 7 8 9
GO:0005829IDAUniProtcytosol1 2 3 4 5 6 7 8 9
GO:0032586IEAUniProtprotein storage vacuole membrane1 2 3 4 5 6 7 8

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008962PapD-like
IPR000535MSP domain

Mapman id Description
28.99DNA.unspecified
No SignalP domains detected for this gene.