Gene: AT3G59420 (Arabidopsis thaliana)

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Gene Identifier
AT3G59420
Transcript Identifier
AT3G59420.1
Gene Type
Coding gene
Location
3 : 21959871-21962558 : negative

Family

Gene family
HOM03M000082
(551 genes in 14 species)
specific family

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Descriptions

Description
crinkly4
Curated Summary
Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes.
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Identifiers

Identifier Name
aliasCR4
aliascrinkly4
aliasACR4
uniprotQ9LX29

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793IMP, RCA, UniProtembryo development ending in seed dormancy1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009786IMPUniProtregulation of asymmetric cell division1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0010311IMPUniProtlateral root formation1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0048829IMPUniProtroot cap development1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0000280RCAGene Ontologynuclear division1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0007000RCAGene Ontologynucleolus organization1
GO:0008356RCAGene Ontologyasymmetric cell division1
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0009737RCAGene Ontologyresponse to abscisic acid1
GO:0009845RCAGene Ontologyseed germination1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0009933RCAGene Ontologymeristem structural organization1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0010182RCAGene Ontologysugar mediated signaling pathway1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0016567RCAGene Ontologyprotein ubiquitination1
GO:0019915RCAGene Ontologylipid storage1
GO:0048825RCAGene Ontologycotyledon development1
GO:0050826RCAGene Ontologyresponse to freezing1
GO:0051301RCAGene Ontologycell division1
GO:0006468IEAInterProprotein phosphorylation
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000082
GO:0006796IEAPLAZA Homologyphosphate-containing compound metabolic processHOM03M000082
GO:0006793IEAPLAZA Homologyphosphorus metabolic processHOM03M000082
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03M000082
GO:0016310IEAPLAZA HomologyphosphorylationHOM03M000082
GO:0043412IEAPLAZA Homologymacromolecule modificationHOM03M000082
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03M000082
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03M000082
GO:0036211IEAPLAZA Homologyprotein modification processHOM03M000082
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03M000082

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016301ISSGene Ontologykinase activity1
GO:0019199ISSUniProttransmembrane receptor protein kinase activity1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0042803IDAUniProtprotein homodimerization activity1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0005524IEAUniProtATP binding1 2 3 4 5 6 7 8 9 10 11 12
GO:0004674IEAUniProtprotein serine/threonine kinase activity1 2 3 4 5 6 7 8 9 10 11 12
GO:0005515IEAInterProprotein binding
GO:0004672IEAInterProprotein kinase activity
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000082
GO:0043168IEAPLAZA Homologyanion bindingHOM03M000082
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000082
GO:0043167IEAPLAZA Homologyion bindingHOM03M000082
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000082
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000082
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000082
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000082
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03M000082
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000082
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000082
GO:0016773IEAPLAZA Homologyphosphotransferase activity, alcohol group as acceptorHOM03M000082
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000082
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03M000082
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000082
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000082
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000082
GO:0016740IEAPLAZA Homologytransferase activityHOM03M000082

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IDA, ISM, UniProtplasma membrane1 2 3 4 5 6 7 8 9 10 11 12 13 14
GO:0009986IDAUniProtcell surface1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0030139IDAUniProtendocytic vesicle1 2 3 4 5 6 7 8 9 10 11 12 13
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5 6 7 8 9 10 11 12
GO:0032585IEAUniProtmultivesicular body membrane1 2 3 4 5 6 7 8 9 10 11 12

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR000719Protein kinase domain
IPR017441Protein kinase, ATP binding site
IPR001368TNFR/NGFR cysteine-rich region
IPR008271Serine/threonine-protein kinase, active site
IPR002290Serine/threonine- / dual specificity protein kinase, catalytic domain
IPR013320Concanavalin A-like lectin/glucanase, subgroup
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
IPR011009Protein kinase-like domain

Mapman id Description
30.2.26signalling.receptor kinases.crinkly like
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network