PLAZA 3.0 Monocots gene overview : AT3G55840

Gene: AT3G55840 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G55840
Transcript Identifier: AT3G55840.1
Gene Type: Coding gene
Location: 3 : 20717530-20718816 : negative

Family

Gene family: HOM03M004043
(23 genes in 13 species)
specific family
Subfamily: ORTHO03M024314
(2 genes in 2 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: Hs1pro-1 protein

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Identifiers

Identifier	Name
uniprot	Q9LY61

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0002679	RCA	Gene Ontology	respiratory burst involved in defense response	1
GO:0009693	RCA	Gene Ontology	ethylene biosynthetic process	1
GO:0010200	RCA	Gene Ontology	response to chitin	1
GO:0035556	RCA	Gene Ontology	intracellular signal transduction	1
GO:0006952	IEA	UniProt	defense response	1 2 3

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IPI	Gene Ontology	protein binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005739	ISM	Gene Ontology	mitochondrion	1
GO:0005737	IEA	UniProt	cytoplasm	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009743	Hs1pro-1, C-terminal
IPR009869	Hs1pro-1, N-terminal

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.