PLAZA 3.0 Monocots gene overview : AT3G55380

Gene: AT3G55380 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G55380
Transcript Identifier: AT3G55380.2
Gene Type: Coding gene
Location: 3 : 20531520-20532895 : positive

Family

Gene family: HOM03M000077
(598 genes in 16 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description: ubiquitin-conjugating enzyme 14

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Identifiers

Identifier	Name
alias	UBC14
alias	ubiquitin-conjugating enzyme 14
uniprot	P42747

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006511	IDA, TAS	Gene Ontology	ubiquitin-dependent protein catabolic process	1 2

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004842	IEA, IDA, ISS	UniProt	ubiquitin-protein ligase activity	1 2 3 4 5 6 7 8
GO:0005524	IEA	UniProt	ATP binding	1 2 3 4 5 6
GO:0016881	IEA	InterPro	acid-amino acid ligase activity
GO:0016874	IEA	PLAZA Homology	ligase activity	HOM03M000077
GO:0016879	IEA	PLAZA Homology	ligase activity, forming carbon-nitrogen bonds	HOM03M000077
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03M000077

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme, E2
IPR023313	Ubiquitin-conjugating enzyme, active site

Mapman id	Description
29.5.11.3	protein.degradation.ubiquitin.E2

No SignalP domains detected for this gene.