PLAZA 3.0 Monocots gene overview : AT3G54720

Gene: AT3G54720 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G54720
Transcript Identifier: AT3G54720.1
Gene Type: Coding gene
Location: 3 : 20254852-20257815 : negative

Family

Gene family: HOM03M001436
(53 genes in 14 species)
specific family
Subfamily: ORTHO03M013744
(3 genes in 3 species)
specific family

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Descriptions

Description: Peptidase M28 family protein

Curated Summary: Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1.

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Identifiers

Identifier	Name
alias	HAUPTLING
alias	HPT
alias	AtAMP1
alias	Multifolia
alias	PT
alias	PRIMORDIA TIMING
alias	COP2
alias	MFO1
alias	CONSTITUTIVE MORPHOGENESIS 2
alias	AMP1
alias	ALTERED MERISTEM PROGRAM 1
uniprot	Q9M1S8

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006508	IMP, ISS, IEA	UniProt	proteolysis	1 2 3 4
GO:0009910	IMP	Gene Ontology	negative regulation of flower development	1
GO:0009640	IMP	UniProt	photomorphogenesis	1 2 3 4
GO:0009790	IMP, IGI	UniProt	embryo development	1 2 3 4 5
GO:0009908	IGI	UniProt	flower development	1 2 3 4
GO:0010305	IGI	UniProt	leaf vascular tissue pattern formation	1 2 3 4
GO:0048364	IGI	Gene Ontology	root development	1
GO:0048507	IGI, IMP	Gene Ontology	meristem development	1 2
GO:0010080	IMP	UniProt	regulation of floral meristem growth	1 2 3
GO:0010081	IMP	UniProt	regulation of inflorescence meristem growth	1 2 3
GO:0010082	IMP	UniProt	regulation of root meristem growth	1 2 3

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004180	ISS	Gene Ontology	carboxypeptidase activity	1
GO:0016805	ISS	Gene Ontology	dipeptidase activity	1
GO:0046872	IEA	UniProt	metal ion binding	1 2 3
GO:0004181	IMP	UniProt	metallocarboxypeptidase activity	1 2 3
GO:0008233	IEA	InterPro	peptidase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005886	ISM	Gene Ontology	plasma membrane	1
GO:0016021	NAS	UniProt	integral to membrane	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR007365	Transferrin receptor-like, dimerisation domain
IPR007484	Peptidase M28

Mapman id	Description
29.5	protein.degradation

No SignalP domains detected for this gene.