Gene: AT3G52400 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G52400
Transcript Identifier
AT3G52400.1
Gene Type
Coding gene
Location
3 : 19425835-19427032 : negative

Family

Gene family
HOM03M000495
(127 genes in 16 species)
specific family

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Descriptions

Description
syntaxin of plants 122
Curated Summary
syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathway
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Identifiers

Identifier Name
aliasSYP122
aliassyntaxin of plants 122
aliasATSYP122
uniprotQ9SVC2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006886ISS, TAS, IEAGene Ontologyintracellular protein transport1 2
GO:0050832IGI, RCA, UniProtdefense response to fungus1 2 3 4 5 6 7
GO:0009863IGI, RCA, UniProtsalicylic acid mediated signaling pathway1 2 3 4 5 6 7
GO:0009867IGI, RCA, UniProtjasmonic acid mediated signaling pathway1 2 3 4 5 6 7
GO:0010363IGI, RCA, UniProtregulation of plant-type hypersensitive response1 2 3 4 5 6 7
GO:0043069IGI, RCA, UniProtnegative regulation of programmed cell death1 2 3 4 5 6 7
GO:0051245IGIUniProtnegative regulation of cellular defense response1 2 3 4 5 6
GO:0006612IDA, RCA, UniProtprotein targeting to membrane1 2 3 4 5 6 7
GO:0000165RCAGene OntologyMAPK cascade1
GO:0002679RCAGene Ontologyrespiratory burst involved in defense response1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0006820RCAGene Ontologyanion transport1
GO:0006862RCAGene Ontologynucleotide transport1
GO:0006888RCAGene OntologyER to Golgi vesicle-mediated transport1
GO:0007154RCAGene Ontologycell communication1
GO:0007165RCAGene Ontologysignal transduction1
GO:0009409RCAGene Ontologyresponse to cold1
GO:0009414RCAGene Ontologyresponse to water deprivation1
GO:0009595RCAGene Ontologydetection of biotic stimulus1
GO:0009617RCAGene Ontologyresponse to bacterium1
GO:0009625RCAGene Ontologyresponse to insect1
GO:0009627RCAGene Ontologysystemic acquired resistance1
GO:0009697RCAGene Ontologysalicylic acid biosynthetic process1
GO:0009723RCAGene Ontologyresponse to ethylene1
GO:0009733RCAGene Ontologyresponse to auxin1
GO:0009738RCAGene Ontologyabscisic acid-activated signaling pathway1
GO:0009753RCAGene Ontologyresponse to jasmonic acid1
GO:0009862RCAGene Ontologysystemic acquired resistance, salicylic acid mediated signaling pathway1
GO:0009963RCAGene Ontologypositive regulation of flavonoid biosynthetic process1
GO:0010200RCAGene Ontologyresponse to chitin1
GO:0010310RCAGene Ontologyregulation of hydrogen peroxide metabolic process1
GO:0015696RCAGene Ontologyammonium transport1
GO:0015802RCAGene Ontologybasic amino acid transport1
GO:0030968RCAGene Ontologyendoplasmic reticulum unfolded protein response1
GO:0031347RCAGene Ontologyregulation of defense response1
GO:0031348RCAGene Ontologynegative regulation of defense response1
GO:0035304RCAGene Ontologyregulation of protein dephosphorylation1
GO:0042538RCAGene Ontologyhyperosmotic salinity response1
GO:0042742RCAGene Ontologydefense response to bacterium1
GO:0043090RCAGene Ontologyamino acid import1
GO:0043269RCAGene Ontologyregulation of ion transport1
GO:0043900RCAGene Ontologyregulation of multi-organism process1
GO:0051707RCAGene Ontologyresponse to other organism1
GO:0016192IEAUniProtvesicle-mediated transport1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005484TAS, IEAGene OntologySNAP receptor activity1
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886IDA, ISM, UniProtplasma membrane1 2 3 4 5 6 7
GO:0009506IDAUniProtplasmodesma1 2 3 4 5 6
GO:0016021IEAUniProtintegral to membrane1 2 3 4 5
GO:0016020IEAInterPromembrane

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000727Target SNARE coiled-coil domain
IPR006011Syntaxin, N-terminal domain
IPR010989t-SNARE
IPR006012Syntaxin/epimorphin, conserved site

Mapman id Description
31.4cell.vesicle transport
No SignalP domains detected for this gene.