Gene: AT3G49240 (Arabidopsis thaliana)

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Gene Identifier
AT3G49240
Transcript Identifier
AT3G49240.1
Gene Type
Coding gene
Location
3 : 18256086-18257975 : positive

Family

Gene family
HOM03M000003
(2428 genes in 16 species)
specific family

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Descriptions

Description
Pentatricopeptide repeat (PPR) superfamily protein
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Identifiers

Identifier Name
aliasemb1796
aliasembryo defective 1796
uniprotQ9M3A8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793IMP, NASRCA, UniProtembryo development ending in seed dormancy1 2 3 4 5 6 7
GO:0009220RCAGene Ontologypyrimidine ribonucleotide biosynthetic process1
GO:0009560RCAGene Ontologyembryo sac egg cell differentiation1
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0009737RCAGene Ontologyresponse to abscisic acid1
GO:0009845RCAGene Ontologyseed germination1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0009933RCAGene Ontologymeristem structural organization1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0010182RCAGene Ontologysugar mediated signaling pathway1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0010564RCAGene Ontologyregulation of cell cycle process1
GO:0016567RCAGene Ontologyprotein ubiquitination1
GO:0019915RCAGene Ontologylipid storage1
GO:0048366RCAGene Ontologyleaf development1
GO:0048825RCAGene Ontologycotyledon development1
GO:0050826RCAGene Ontologyresponse to freezing1
GO:0051301RCAGene Ontologycell division1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IDAUniProtATP binding1 2 3 4 5
GO:0005515IEAInterProprotein binding
GO:0005488IEAPLAZA HomologybindingHOM03M000003

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739IDA, ISM, UniProtmitochondrion1 2 3 4 5 6
GO:0009507IDAUniProtchloroplast1 2 3 4 5

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002885Pentatricopeptide repeat
IPR011990Tetratricopeptide-like helical

Mapman id Description
35.1.5not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
No SignalP domains detected for this gene.