Gene: AT3G48100 (Arabidopsis thaliana)

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Gene Identifier
AT3G48100
Transcript Identifier
AT3G48100.1
Gene Type
Coding gene
Location
3 : 17759112-17760740 : negative

Family

Gene family
HOM03M000363
(165 genes in 14 species)
specific family
Subfamily
ORTHO03M005786
(6 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
response regulator 5
Curated Summary
Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay.
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Identifiers

Identifier Name
aliasARR5
aliasINDUCED BY CYTOKININ 6
aliasRR5
aliasresponse regulator 5
aliasIBC6
aliasARABIDOPSIS THALIANA RESPONSE REGULATOR 2
aliasATRR2
uniprotQ9SB04

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009735IEPGene Ontologyresponse to cytokinin1
GO:0006355TAS, IEA, UniProtregulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9
GO:0009736IMP, RCATAS, UniProtcytokinin-activated signaling pathway1 2 3 4 5 6 7 8 9 10 11
GO:0010114IMPUniProtresponse to red light1 2 3 4 5 6 7 8 9
GO:0007623IMP, RCA, UniProtcircadian rhythm1 2 3 4 5 6 7 8 9 10
GO:0006612RCAGene Ontologyprotein targeting to membrane1
GO:0009963RCAGene Ontologypositive regulation of flavonoid biosynthetic process1
GO:0010363RCAGene Ontologyregulation of plant-type hypersensitive response1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8
GO:0000160IEAInterProphosphorelay signal transduction system
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000363

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IMP, ISSIEA, UniProtphosphorelay response regulator activity1 2 3 4 5 6 7 8 9 10
GO:0005515IPIGene Ontologyprotein binding1
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03M000363
GO:0004871IEAPLAZA Homologysignal transducer activityHOM03M000363

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9 10
GO:0005737IDAUniProtcytoplasm1 2 3 4 5 6 7 8 9

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001789Signal transduction response regulator, receiver domain
IPR011006CheY-like superfamily

Mapman id Description
27.3.5RNA.regulation of transcription.ARR
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBOrphans