Gene: AT3G48050 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G48050
Transcript Identifier
AT3G48050.1
Gene Type
Coding gene
Location
3 : 17734270-17739412 : negative

Family

Gene family
HOM03M001833
(43 genes in 16 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
BAH domain ;TFIIS helical bundle-like domain
Curated Summary
Encodes a large protein with N-terminal bromo-adjacent homology (BAH) and transcription elongation factor S-II (TFS2N) domains and two C-terminal GW (glycine and tryptophan) repeats. It is nuclear and colocalizes with the processing-body component DCP1 in the cytoplasm. SOU is a component of the miRNA pathway and is involved in translational repression.
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Identifiers

Identifier Name
aliasSUO
alias'shuttle' in chinese

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031053IMPGene Ontologyprimary miRNA processing1
GO:0035278IDAGene Ontologynegative regulation of translation involved in gene silencing by miRNA1
GO:0006351IEAInterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000932IDAGene Ontologycytoplasmic mRNA processing body1
GO:0005634IDA, IEAGene Ontologynucleus1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923Transcription factor IIS, N-terminal
IPR001025Bromo adjacent homology (BAH) domain

Mapman id Description
27.3.99RNA.regulation of transcription.unclassified
No SignalP domains detected for this gene.