Gene: AT3G46510 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G46510
Transcript Identifier
AT3G46510.1
Gene Type
Coding gene
Location
3 : 17124106-17126539 : negative

Family

Gene family
HOM03M000053
(736 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
plant U-box 13
Curated Summary
Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2.
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Identifiers

Identifier Name
aliasPUB13
aliasARABIDOPSIS THALIANA PLANT U-BOX 13
aliasATPUB13
aliasplant U-box 13
uniprotQ9SNC6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567IDA, IEAGene Ontologyprotein ubiquitination1
GO:0042742IGIUniProtdefense response to bacterium1 2 3 4 5 6
GO:0000902RCAGene Ontologycell morphogenesis1
GO:0006487RCAGene Ontologyprotein N-linked glycosylation1
GO:0006499RCAGene OntologyN-terminal protein myristoylation1
GO:0016049RCAGene Ontologycell growth1
GO:0032880RCAGene Ontologyregulation of protein localization1
GO:0046777RCAGene Ontologyprotein autophosphorylation1
GO:0048193RCAGene OntologyGolgi vesicle transport1
GO:0048767RCAGene Ontologyroot hair elongation1
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000053
GO:0032446IEAPLAZA Homologyprotein modification by small protein conjugationHOM03M000053
GO:0070647IEAPLAZA Homologyprotein modification by small protein conjugation or removalHOM03M000053
GO:0043412IEAPLAZA Homologymacromolecule modificationHOM03M000053
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03M000053
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03M000053
GO:0036211IEAPLAZA Homologyprotein modification processHOM03M000053
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03M000053

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842IDA, IEA, UniProtubiquitin-protein ligase activity1 2 3 4 5 6
GO:0070696IPIGene Ontologytransmembrane receptor protein serine/threonine kinase binding1
GO:0005515IPI, IEAGene Ontologyprotein binding1
GO:0005488IEAInterProbinding
GO:0016874IEAPLAZA Homologyligase activityHOM03M000053
GO:0019787IEAPLAZA Homologysmall conjugating protein ligase activityHOM03M000053
GO:0016881IEAPLAZA Homologyacid-amino acid ligase activityHOM03M000053
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03M000053

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7
GO:0005737IDAGene Ontologycytoplasm1
GO:0005829IDAUniProtcytosol1 2 3 4 5 6
GO:0000151IEAUniProtubiquitin ligase complex1 2 3 4 5
GO:0005622IEAPLAZA HomologyintracellularHOM03M000053
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03M000053
GO:1902494IEAPLAZA Homologycatalytic complexHOM03M000053
GO:0005623IEAPLAZA HomologycellHOM03M000053
GO:0043234IEAPLAZA Homologyprotein complexHOM03M000053
GO:0044464IEAPLAZA Homologycell partHOM03M000053
GO:0044424IEAPLAZA Homologyintracellular partHOM03M000053

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000225Armadillo
IPR011989Armadillo-like helical
IPR003613U box domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR016024Armadillo-type fold

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.