Gene: AT3G28030 (Arabidopsis thaliana)

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Gene Identifier
AT3G28030
Transcript Identifier
AT3G28030.1
Gene Type
Coding gene
Location
3 : 10424321-10431178 : positive

Family

Gene family
HOM03M003112
(28 genes in 16 species)
specific family
Subfamily
ORTHO03M013653
(3 genes in 3 species)
specific family

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Descriptions

Description
5'-3' exonuclease family protein
Curated Summary
Required for repair of pyrimidine-pyrimidinone (6-4) dimers.
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Identifiers

Identifier Name
aliasUV REPAIR DEFECTIVE 1
aliasULTRAVIOLET HYPERSENSITIVE 3
aliasUVR1
aliasUVH3
uniprotQ9ATY5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281ISS, IEAGene OntologyDNA repair1
GO:0010224IGIUniProtresponse to UV-B1 2 3
GO:0009408IMPUniProtresponse to heat1 2 3
GO:0006486RCAGene Ontologyprotein glycosylation1
GO:0010213IMPUniProtnon-photoreactive DNA repair1 2 3
GO:0090305IEAUniProtnucleic acid phosphodiester bond hydrolysis1 2
GO:0006289IEAUniProtnucleotide-excision repair1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004518ISS, IEAGene Ontologynuclease activity1
GO:0005515IPIGene Ontologyprotein binding1
GO:0004519IEAUniProtendonuclease activity1 2
GO:0046872IEAUniProtmetal ion binding1 2
GO:0003697IEAUniProtsingle-stranded DNA binding1 2
GO:0016788IEAInterProhydrolase activity, acting on ester bonds
GO:0003824IEAInterProcatalytic activity
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001044XPG/Rad2 endonuclease, eukaryotes
IPR0200455'-3' exonuclease, C-terminal domain
IPR006086XPG-I domain
IPR006085XPG N-terminal
IPR006084XPG/Rad2 endonuclease
IPR008918Helix-hairpin-helix motif, class 2
IPR019974XPG conserved site

Mapman id Description
28.2DNA.repair
No SignalP domains detected for this gene.