Gene: AT3G27690 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT3G27690
- Transcript Identifier
- AT3G27690.1
- Gene Type
- Coding gene
- Location
- 3 : 10256002-10256921 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
photosystem II light harvesting complex gene 2.3
- Curated Summary
-
Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.
Identifiers
Identifier | Name |
---|---|
alias | LHCB2.4 |
alias | photosystem II light harvesting complex gene 2.3 |
alias | LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2 |
alias | LHCB2 |
alias | LHCB2.3 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0015979 | ISS | Gene Ontology | photosynthesis | 1 |
GO:0009637 | IEP, RCA | Gene Ontology | response to blue light | 1 2 |
GO:0010114 | IEP, RCA | Gene Ontology | response to red light | 1 2 |
GO:0010218 | IEP, RCA | Gene Ontology | response to far red light | 1 2 |
GO:0006364 | RCA | Gene Ontology | rRNA processing | 1 |
GO:0009644 | RCA | Gene Ontology | response to high light intensity | 1 |
GO:0009744 | RCA | Gene Ontology | response to sucrose | 1 |
GO:0010155 | RCA | Gene Ontology | regulation of proton transport | 1 |
GO:0042631 | RCA | Gene Ontology | cellular response to water deprivation | 1 |
GO:0009765 | IEA | InterPro | photosynthesis, light harvesting | |
GO:0006091 | IEA | PLAZA Homology | generation of precursor metabolites and energy | HOM03M000124 |
GO:0019684 | IEA | PLAZA Homology | photosynthesis, light reaction | HOM03M000124 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016168 | ISS | Gene Ontology | chlorophyll binding | 1 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009507 | ISM | Gene Ontology | chloroplast | 1 |
GO:0030076 | ISS | Gene Ontology | light-harvesting complex | 1 |
GO:0009941 | IDA | Gene Ontology | chloroplast envelope | 1 |
GO:0009535 | IDA | Gene Ontology | chloroplast thylakoid membrane | 1 |
GO:0009579 | IDA | Gene Ontology | thylakoid | 1 |
GO:0005794 | RCA | Gene Ontology | Golgi apparatus | 1 |
GO:0016020 | IEA | InterPro | membrane |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
1.1.1.1 | PS.lightreaction.photosystem II.LHC-II |
No SignalP domains detected for this gene.