Gene: AT3G26560 (Arabidopsis thaliana)

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Gene Identifier
AT3G26560
Transcript Identifier
AT3G26560.1
Gene Type
Coding gene
Location
3 : 9750122-9753719 : negative

Family

Gene family
HOM03M000133
(353 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
ATP-dependent RNA helicase, putative
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Identifiers

Identifier Name
uniprotQ38953

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000226RCAGene Ontologymicrotubule cytoskeleton organization1
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0006486RCAGene Ontologyprotein glycosylation1
GO:0006397IEAUniProtmRNA processing1 2 3 4 5
GO:0008380IEAUniProtRNA splicing1 2 3 4 5

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEA, ISSUniProtRNA binding1 2 3 4 5 6
GO:0004004ISSGene OntologyATP-dependent RNA helicase activity1
GO:0005524IEA, ISSUniProtATP binding1 2 3 4 5 6
GO:0008026IEAUniProtATP-dependent helicase activity1 2 3 4 5
GO:0004386IEAInterProhelicase activity
GO:0003676IEAInterPronucleic acid binding
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000133
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03M000133
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000133
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000133
GO:0016887IEAPLAZA HomologyATPase activityHOM03M000133
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000133
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03M000133

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6
GO:0005739IDAUniProtmitochondrion1 2 3 4 5 6
GO:0005829IDAUniProtcytosol1 2 3 4 5 6
GO:0009506IDAUniProtplasmodesma1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
IPR003029Ribosomal protein S1, RNA-binding domain
IPR001650Helicase, C-terminal
IPR012340Nucleic acid-binding, OB-fold
IPR007502Helicase-associated domain
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011709Domain of unknown function DUF1605
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR022967RNA-binding domain, S1

Mapman id Description
27.1RNA.processing
No SignalP domains detected for this gene.