Gene: AT3G22170 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G22170
Transcript Identifier
AT3G22170.1
Gene Type
Coding gene
Location
3 : 7822359-7825414 : negative

Family

Gene family
HOM03M000032
(887 genes in 13 species)
specific family
Subfamily
ORTHO03M013118
(3 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
far-red elongated hypocotyls 3
Curated Summary
A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1.
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Identifiers

Identifier Name
aliasCPD45
aliasCHLOROPLAST DIVISION MUTANT 45
aliasfar-red elongated hypocotyls 3
aliasFHY3
uniprotQ9LIE5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009585IMPUniProtred, far-red light phototransduction1 2 3 4 5 6 7 8 9 10
GO:0007623IMPUniProtcircadian rhythm1 2 3 4 5 6 7 8 9 10
GO:0010017IMPGene Ontologyred or far-red light signaling pathway1
GO:0010218IMPUniProtresponse to far red light1 2 3 4 5 6 7 8 9 10
GO:0045893IDAUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10
GO:0042753IMPUniProtpositive regulation of circadian rhythm1 2 3 4 5 6 7 8 9 10
GO:0000956RCAGene Ontologynuclear-transcribed mRNA catabolic process1
GO:0006487RCAGene Ontologyprotein N-linked glycosylation1
GO:0008284RCAGene Ontologypositive regulation of cell proliferation1
GO:0009630RCAGene Ontologygravitropism1
GO:0009639RCAGene Ontologyresponse to red or far red light1
GO:0005975IEAUniProtcarbohydrate metabolic process1 2 3 4 5 6 7 8 9
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IDAUniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10
GO:0004553IEAUniProthydrolase activity, hydrolyzing O-glycosyl compounds1 2 3 4 5 6 7 8 9
GO:0008270IEAUniProtzinc ion binding1 2 3 4 5 6 7 8 9

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISM, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001000Glycoside hydrolase, family 10
IPR006564Zinc finger, PMZ-type
IPR018289MULE transposase domain
IPR004330FAR1 DNA binding domain
IPR007527Zinc finger, SWIM-type

Mapman id Description
30.11signalling.light
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBFAR1
PlantTFDBFAR1