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WorkbenchGene: AT3G22170 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT3G22170
- Transcript Identifier
- AT3G22170.1
- Gene Type
- Coding gene
- Location
- 3 : 7822359-7825414 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
far-red elongated hypocotyls 3
- Curated Summary
-
A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1.
Identifiers
| Identifier | Name |
|---|---|
| alias | CPD45 |
| alias | CHLOROPLAST DIVISION MUTANT 45 |
| alias | far-red elongated hypocotyls 3 |
| alias | FHY3 |
| uniprot | Q9LIE5 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0009585 | IMP | UniProt | red, far-red light phototransduction | 1 2 3 4 5 6 7 8 9 10 |
| GO:0007623 | IMP | UniProt | circadian rhythm | 1 2 3 4 5 6 7 8 9 10 |
| GO:0010017 | IMP | Gene Ontology | red or far-red light signaling pathway | 1 |
| GO:0010218 | IMP | UniProt | response to far red light | 1 2 3 4 5 6 7 8 9 10 |
| GO:0045893 | IDA | UniProt | positive regulation of transcription, DNA-dependent | 1 2 3 4 5 6 7 8 9 10 |
| GO:0042753 | IMP | UniProt | positive regulation of circadian rhythm | 1 2 3 4 5 6 7 8 9 10 |
| GO:0000956 | RCA | Gene Ontology | nuclear-transcribed mRNA catabolic process | 1 |
| GO:0006487 | RCA | Gene Ontology | protein N-linked glycosylation | 1 |
| GO:0008284 | RCA | Gene Ontology | positive regulation of cell proliferation | 1 |
| GO:0009630 | RCA | Gene Ontology | gravitropism | 1 |
| GO:0009639 | RCA | Gene Ontology | response to red or far red light | 1 |
| GO:0005975 | IEA | UniProt | carbohydrate metabolic process | 1 2 3 4 5 6 7 8 9 |
| GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 3 4 5 6 7 8 9 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003700 | IDA | UniProt | sequence-specific DNA binding transcription factor activity | 1 2 3 4 5 6 7 8 9 10 |
| GO:0004553 | IEA | UniProt | hydrolase activity, hydrolyzing O-glycosyl compounds | 1 2 3 4 5 6 7 8 9 |
| GO:0008270 | IEA | UniProt | zinc ion binding | 1 2 3 4 5 6 7 8 9 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | IDA, ISM, | UniProt | nucleus | 1 2 3 4 5 6 7 8 9 10 11 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 30.11 | signalling.light |
No SignalP domains detected for this gene.