Gene: AT3G20810 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G20810
Transcript Identifier
AT3G20810.2
Gene Type
Coding gene
Location
3 : 7275814-7278144 : positive

Family

Gene family
HOM03M003001
(28 genes in 16 species)
specific family

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Descriptions

Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curated Summary
JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. The jumonji-C is frequently found in proteins with histone demethylase activity. jmjd5 mutant plants have a short-period circadian phenotype.
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Identifiers

Identifier Name
aliasJMJ30
aliasJumonji C domain-containing protein 30
aliasjumonji domain containing 5
aliasJMJD5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007623IMPGene Ontologycircadian rhythm1
GO:0042752IMPGene Ontologyregulation of circadian rhythm1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003347JmjC domain

Mapman id Description
27.3.57RNA.regulation of transcription.JUMONJI family
No SignalP domains detected for this gene.