Gene: AT3G20780 (Arabidopsis thaliana)

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Gene Identifier
AT3G20780
Transcript Identifier
AT3G20780.1
Gene Type
Coding gene
Location
3 : 7264025-7268498 : negative

Family

Gene family
HOM03M004381
(22 genes in 16 species)
specific family

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Descriptions

Description
topoisomerase 6 subunit B
Curated Summary
Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.
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Identifiers

Identifier Name
aliasELONGATED HYPOCOTYL 6
aliasBIN3
aliasROOT HAIRLESS 3
aliasHYP6
aliasRHL3
aliasBRASSINOSTEROID INSENSITIVE 3
aliasATTOP6B
aliasTOP6B
aliastopoisomerase 6 subunit B
uniprotQ9C5V6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009741IMPUniProtresponse to brassinosteroid1 2 3 4 5 6 7
GO:0042023IMPUniProtDNA endoreduplication1 2 3 4 5 6 7
GO:0000278RCAGene Ontologymitotic cell cycle1
GO:0003002RCAGene Ontologyregionalization1
GO:0006355RCAGene Ontologyregulation of transcription, DNA-dependent1
GO:0006396RCAGene OntologyRNA processing1
GO:0007155RCAGene Ontologycell adhesion1
GO:0010090RCAGene Ontologytrichome morphogenesis1
GO:0033043RCAGene Ontologyregulation of organelle organization1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0045010RCAGene Ontologyactin nucleation1
GO:0045893RCAGene Ontologypositive regulation of transcription, DNA-dependent1
GO:0048449RCAGene Ontologyfloral organ formation1
GO:0007389IMPUniProtpattern specification process1 2 3 4 5 6 7
GO:0010026IMPUniProttrichome differentiation1 2 3 4 5 6 7
GO:0006265IEAUniProtDNA topological change1 2 3 4 5 6

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003918ISS, IEA, UniProtDNA topoisomerase type II (ATP-hydrolyzing) activity1 2 3 4 5 6 7
GO:0005515IPIGene Ontologyprotein binding1
GO:0042802IPIGene Ontologyidentical protein binding1
GO:0005524IEAUniProtATP binding1 2 3 4 5 6
GO:0003677IEAUniProtDNA binding1 2 3 4 5 6
GO:0061505IEAPLAZA HomologyDNA topoisomerase II activityHOM03M004381

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7
GO:0009330ISSUniProtDNA topoisomerase complex (ATP-hydrolyzing)1 2 3 4 5 6 7
GO:0005694IEAUniProtchromosome1 2 3 4 5 6

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR015320DNA topoisomerase VI, subunit B, transducer
IPR020568Ribosomal protein S5 domain 2-type fold
IPR005734DNA topoisomerase VI, subunit B

Mapman id Description
17.3.3hormone metabolism.brassinosteroid.induced-regulated-responsive-activated
No SignalP domains detected for this gene.