Gene: AT3G19510 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G19510
Transcript Identifier
AT3G19510.1
Gene Type
Coding gene
Location
3 : 6763205-6766049 : negative

Family

Gene family
HOM03M001809
(44 genes in 16 species)
specific family
Subfamily
ORTHO03M004708
(7 genes in 7 species)
specific family

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Descriptions

Description
Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain
Curated Summary
Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.
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Identifiers

Identifier Name
aliasHAT3.1
uniprotQ04996

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, RCA, IEAGene Ontologyregulation of transcription, DNA-dependent1 2
GO:0045893IDA, RCA, UniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6
GO:0008284RCAGene Ontologypositive regulation of cell proliferation1
GO:0009560RCAGene Ontologyembryo sac egg cell differentiation1
GO:0043687RCAGene Ontologypost-translational protein modification1
GO:0051276RCAGene Ontologychromosome organization1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001809

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, IEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5
GO:0043565IDA, IEA, UniProtsequence-specific DNA binding1 2 3 4 5
GO:0003677IDA, IEAGene OntologyDNA binding1
GO:0008270IEAUniProtzinc ion binding1 2 3 4
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISM, ISSUniProtnucleus1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019787Zinc finger, PHD-finger
IPR001356Homeobox domain
IPR009057Homeodomain-like
IPR001965Zinc finger, PHD-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019786Zinc finger, PHD-type, conserved site
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBHB
PlantTFDBHB-PHD