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WorkbenchGene: AT3G16610 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT3G16610
- Transcript Identifier
- AT3G16610.1
- Gene Type
- Coding gene
- Location
- 3 : 5656371-5658335 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Identifiers
| Identifier | Name |
|---|---|
| uniprot | Q9LUS3 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006302 | RCA | Gene Ontology | double-strand break repair | 1 |
| GO:0006312 | RCA | Gene Ontology | mitotic recombination | 1 |
| GO:0007062 | RCA | Gene Ontology | sister chromatid cohesion | 1 |
| GO:0007129 | RCA | Gene Ontology | synapsis | 1 |
| GO:0007131 | RCA | Gene Ontology | reciprocal meiotic recombination | 1 |
| GO:0042138 | RCA | Gene Ontology | meiotic DNA double-strand break formation | 1 |
| GO:0045132 | RCA | Gene Ontology | meiotic chromosome segregation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | IEA | PLAZA Homology | protein binding | HOM03M000001 |
| GO:0005488 | IEA | PLAZA Homology | binding | HOM03M000001 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | 1 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 35.1.5 | not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein |
No SignalP domains detected for this gene.