Gene: AT3G16600 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT3G16600
- Transcript Identifier
- AT3G16600.1
- Gene Type
- Coding gene
- Location
- 3 : 5652839-5655670 : negative
Family
- Gene family
Descriptions
- Description
-
SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Identifiers
Identifier | Name |
---|
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
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Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003677 | ISS, IEA | Gene Ontology | DNA binding | 1 |
GO:0004386 | ISS, IEA | Gene Ontology | helicase activity | 1 |
GO:0005524 | ISS, IEA | Gene Ontology | ATP binding | 1 |
GO:0008270 | ISS, IEA | Gene Ontology | zinc ion binding | 1 |
GO:0005515 | IEA | InterPro | protein binding | |
GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | ISM | Gene Ontology | nucleus | 1 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain |
IPR017907 | Zinc finger, RING-type, conserved site |
IPR001841 | Zinc finger, RING-type |
IPR001650 | Helicase, C-terminal |
IPR000330 | SNF2-related |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR013083 | Zinc finger, RING/FYVE/PHD-type |
Mapman id | Description |
---|---|
27.3.44 | RNA.regulation of transcription.Chromatin Remodeling Factors |
No SignalP domains detected for this gene.
Database | Type |
---|---|
PlnTFDB | SNF2 |