Gene: AT3G15170 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G15170
Transcript Identifier
AT3G15170.1
Gene Type
Coding gene
Location
3 : 5109912-5111435 : positive

Family

Gene family
HOM03M000023
(1250 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Curated Summary
Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). Cuc mutant was first recognized at the heart stage, where embryos lacking two distinct bulges of cotyledonary primordia were observed.
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Identifiers

Identifier Name
aliasANAC054
aliasCUP-SHAPED COTYLEDON1
aliasCUC1
aliasATNAC1
aliasArabidopsis NAC domain containing protein 54
uniprotQ9FRV4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048467IGIUniProtgynoecium development1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
GO:0010072TASUniProtprimary shoot apical meristem specification1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
GO:0048527TASUniProtlateral root development1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
GO:0051782IMPUniProtnegative regulation of cell division1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
GO:0010223IMPUniProtsecondary shoot formation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
GO:0010093RCAGene Ontologyspecification of floral organ identity1
GO:0048440RCAGene Ontologycarpel development1
GO:0048507RCAGene Ontologymeristem development1
GO:0009790IGIGene Ontologyembryo development1
GO:0009908IGI, IMPGene Ontologyflower development1 2
GO:0010014IGI, IMPGene Ontologymeristem initiation1 2
GO:0010160IGIUniProtformation of organ boundary1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000023
GO:0010467IEAPLAZA Homologygene expressionHOM03M000023
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000023
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000023
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000023
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000023
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000023
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000023
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000023
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000023
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000023
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000023
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000023
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000023
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000023
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000023
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000023
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000023
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03M000023
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03M000023
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000023
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000023
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000023
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000023
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000023
GO:0009987IEAPLAZA Homologycellular processHOM03M000023
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000023
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000023
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000023
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000023
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000023
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000023
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000023
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000023
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000023
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000023
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000023
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000023
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000023
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000023
GO:0008152IEAPLAZA Homologymetabolic processHOM03M000023
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03M000023
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000023

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, TAS, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
GO:0003677IEAUniProtDNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000023
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000023
GO:0005488IEAPLAZA HomologybindingHOM03M000023
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000023

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003441NAC domain

Mapman id Description
27.3.27RNA.regulation of transcription.NAC domain transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBNAC
PlantTFDBNAC