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WorkbenchGene: AT3G13890 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT3G13890
- Transcript Identifier
- AT3G13890.1
- Gene Type
- Coding gene
- Location
- 3 : 4576744-4578027 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
myb domain protein 26
- Curated Summary
-
Encodes a putative transcription factor (MYB26). Mutants produces fertile pollen but plants are sterile because anthers do not dehisce. The cellulosic secondary wall thickenings are not formed in the endothecium as they are in non-mutant plants.
Identifiers
| Identifier | Name |
|---|---|
| alias | MALE STERILE 35 |
| alias | myb domain protein 26 |
| alias | MYB26 |
| alias | MS35 |
| alias | ATMYB26 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006355 | ISS | Gene Ontology | regulation of transcription, DNA-dependent | 1 |
| GO:0009901 | IMP | Gene Ontology | anther dehiscence | 1 |
| GO:0009739 | IEP | Gene Ontology | response to gibberellin stimulus | 1 |
| GO:0009834 | IMP | Gene Ontology | secondary cell wall biogenesis | 1 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003677 | ISS, IEA | Gene Ontology | DNA binding | 1 |
| GO:0003700 | ISS | Gene Ontology | sequence-specific DNA binding transcription factor activity | 1 |
| GO:0003682 | IEA | InterPro | chromatin binding | |
| GO:0005488 | IEA | PLAZA Homology | binding | HOM03M000013 |
| GO:1901363 | IEA | PLAZA Homology | heterocyclic compound binding | HOM03M000013 |
| GO:0097159 | IEA | PLAZA Homology | organic cyclic compound binding | HOM03M000013 |
| GO:0003676 | IEA | PLAZA Homology | nucleic acid binding | HOM03M000013 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | IDA, ISM | Gene Ontology | nucleus | 1 2 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 27.3.25 | RNA.regulation of transcription.MYB domain transcription factor family |
No SignalP domains detected for this gene.