Gene: AT3G13772 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G13772
Transcript Identifier
AT3G13772.1
Gene Type
Coding gene
Location
3 : 4521712-4524394 : negative

Family

Gene family
HOM03M000189
(261 genes in 16 species)
specific family
Subfamily
ORTHO03M000919
(11 genes in 7 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
transmembrane nine 7
Curated Summary
Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.
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Identifiers

Identifier Name
aliasAtTMN7
aliasTMN7
aliastransmembrane nine 7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006878IDAGene Ontologycellular copper ion homeostasis1
GO:0006882IDAGene Ontologycellular zinc ion homeostasis1
GO:0000394RCAGene OntologyRNA splicing, via endonucleolytic cleavage and ligation1
GO:0009086RCAGene Ontologymethionine biosynthetic process1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region1
GO:0016021ISS, IEAGene Ontologyintegral to membrane1
GO:0005794IDAGene OntologyGolgi apparatus1
GO:0005774IDAGene Ontologyvacuolar membrane1
GO:0005634IDAGene Ontologynucleus1
GO:0005737IDAGene Ontologycytoplasm1
GO:0005768IDAGene Ontologyendosome1
GO:0005802IDAGene Ontologytrans-Golgi network1
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03M000189
GO:0044425IEAPLAZA Homologymembrane partHOM03M000189

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004240Nonaspanin (TM9SF)
IPR016196Major facilitator superfamily domain, general substrate transporter

Mapman id Description
35.2not assigned.unknown
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network