Gene: AT3G13682 (Arabidopsis thaliana)

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Gene Identifier
AT3G13682
Transcript Identifier
AT3G13682.1
Gene Type
Coding gene
Location
3 : 4479193-4481509 : negative

Family

Gene family
HOM03M000331
(175 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
LSD1-like2
Curated Summary
Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.
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Identifiers

Identifier Name
aliasLDL2
aliasLSD1-like2
uniprotQ9LID0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0051568IMPUniProthistone H3-K4 methylation1 2 3
GO:0006355IEAUniProtregulation of transcription, DNA-dependent1 2
GO:0006351IEAUniProttranscription, DNA-templated1 2
GO:0055114IEAInterProoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008131ISSGene Ontologyprimary amine oxidase activity1
GO:0003677IEAUniProtDNA binding1 2
GO:0016491IEAUniProtoxidoreductase activity1 2
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISMGene Ontologymitochondrion1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007526SWIRM domain
IPR016040NAD(P)-binding domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR002937Amine oxidase
IPR009057Homeodomain-like

Mapman id Description
26.7misc.oxidases - copper, flavone etc
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSWI/SNF-SWI3