PLAZA 3.0 Monocots gene overview : AT3G10720

Gene: AT3G10720 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G10720
Transcript Identifier: AT3G10720.2
Gene Type: Coding gene
Location: 3 : 3354639-3357581 : negative

Family

Gene family: HOM03M000058
(719 genes in 14 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

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Descriptions

Description: Plant invertase/pectin methylesterase inhibitor superfamily

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Identifiers

Identifier	Name
uniprot	Q94CB1

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0042545	IEA, ISS	UniProt	cell wall modification	1 2 3 4 5
GO:0016126	RCA	Gene Ontology	sterol biosynthetic process	1
GO:0043086	IEA	UniProt	negative regulation of catalytic activity	1 2 3 4
GO:0045490	IEA	UniProt	pectin catabolic process	1 2 3 4
GO:0009987	IEA	PLAZA Homology	cellular process	HOM03M000058
GO:0045229	IEA	PLAZA Homology	external encapsulating structure organization	HOM03M000058
GO:0071555	IEA	PLAZA Homology	cell wall organization	HOM03M000058
GO:0071554	IEA	PLAZA Homology	cell wall organization or biogenesis	HOM03M000058
GO:0071840	IEA	PLAZA Homology	cellular component organization or biogenesis	HOM03M000058
GO:0016043	IEA	PLAZA Homology	cellular component organization	HOM03M000058

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0030599	IEA, ISS	UniProt	pectinesterase activity	1 2 3 4 5
GO:0045330	IEA	UniProt	aspartyl esterase activity	1 2 3 4
GO:0004857	IEA	UniProt	enzyme inhibitor activity	1 2 3 4
GO:0052689	IEA	PLAZA Homology	carboxylic ester hydrolase activity	HOM03M000058
GO:0016788	IEA	PLAZA Homology	hydrolase activity, acting on ester bonds	HOM03M000058
GO:0003824	IEA	PLAZA Homology	catalytic activity	HOM03M000058
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03M000058

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005576	IEA, ISM	UniProt	extracellular region	1 2 3 4 5
GO:0009505	ISS	Gene Ontology	plant-type cell wall	1
GO:0005618	IEA	UniProt	cell wall	1 2 3 4
GO:0030312	IEA	PLAZA Homology	external encapsulating structure	HOM03M000058
GO:0005623	IEA	PLAZA Homology	cell	HOM03M000058
GO:0071944	IEA	PLAZA Homology	cell periphery	HOM03M000058
GO:0044464	IEA	PLAZA Homology	cell part	HOM03M000058

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006501	Pectinesterase inhibitor domain
IPR011050	Pectin lyase fold/virulence factor
IPR012334	Pectin lyase fold
IPR000070	Pectinesterase, catalytic
IPR018040	Pectinesterase, active site

Mapman id	Description
10.8.1	cell wall.pectin*esterases.PME

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network