Gene: AT3G09840 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G09840
Transcript Identifier
AT3G09840.1
Gene Type
Coding gene
Location
3 : 3019494-3022832 : positive

Family

Gene family
HOM03M000030
(1059 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
cell division cycle 48
Curated Summary
Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation.
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Identifiers

Identifier Name
aliasATCDC48
aliascell division cycle 48
aliasCDC48
aliasCDC48A
uniprotP54609

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046686IEP, RCA, UniProtresponse to cadmium ion1 2 3 4 5 6 7 8 9 10
GO:0009846IMPUniProtpollen germination1 2 3 4 5 6 7 8 9
GO:0009860IMPUniProtpollen tube growth1 2 3 4 5 6 7 8 9
GO:0051301IMPUniProtcell division1 2 3 4 5 6 7 8 9
GO:0006486RCAGene Ontologyprotein glycosylation1
GO:0016310RCAGene Ontologyphosphorylation1
GO:0042742RCAGene Ontologydefense response to bacterium1
GO:0007049IEAUniProtcell cycle1 2 3 4 5 6 7 8
GO:0015031IEAUniProtprotein transport1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016887ISSGene OntologyATPase activity1
GO:0042802IPIGene Ontologyidentical protein binding1
GO:0005515IPIGene Ontologyprotein binding1
GO:0005524IEAUniProtATP binding1 2 3 4 5 6 7 8
GO:0017111IEAUniProtnucleoside-triphosphatase activity1 2 3 4 5 6 7 8
GO:0016787IEAInterProhydrolase activity
GO:0000166IEAInterPronucleotide binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000030
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000030
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000030
GO:0043168IEAPLAZA Homologyanion bindingHOM03M000030
GO:0043167IEAPLAZA Homologyion bindingHOM03M000030
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000030
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000030
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000030
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000030
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000030
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000030
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000030
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000030
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000030
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000030
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000030
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03M000030
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000030
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000030
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000030
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMGene Ontologynucleus1 2
GO:0022626IDAUniProtcytosolic ribosome1 2 3 4 5 6 7 8 9
GO:0005618IDAUniProtcell wall1 2 3 4 5 6 7 8 9
GO:0005886IDAUniProtplasma membrane1 2 3 4 5 6 7 8 9
GO:0005635IDAUniProtnuclear envelope1 2 3 4 5 6 7 8 9
GO:0005730IDAUniProtnucleolus1 2 3 4 5 6 7 8 9
GO:0005819IDAUniProtspindle1 2 3 4 5 6 7 8 9
GO:0009524IDAUniProtphragmoplast1 2 3 4 5 6 7 8 9
GO:0005829IDAGene Ontologycytosol1
GO:0009506IDAUniProtplasmodesma1 2 3 4 5 6 7 8 9
GO:0048046IDAUniProtapoplast1 2 3 4 5 6 7 8 9
GO:0005794IDAUniProtGolgi apparatus1 2 3 4 5 6 7 8 9
GO:0005737IDAGene Ontologycytoplasm1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004201CDC48, domain 2
IPR003338CDC48, N-terminal subdomain
IPR003960ATPase, AAA-type, conserved site
IPR003593AAA+ ATPase domain
IPR003959ATPase, AAA-type, core
IPR009010Aspartate decarboxylase-like domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005938AAA ATPase, CDC48 family

Mapman id Description
31.2cell.division
No SignalP domains detected for this gene.