Gene: AT3G09600 (Arabidopsis thaliana)

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Gene Identifier
AT3G09600
Transcript Identifier
AT3G09600.1
Gene Type
Coding gene
Location
3 : 2946459-2948270 : positive

Family

Gene family
HOM03M000510
(126 genes in 16 species)
specific family
Subfamily
ORTHO03M005930
(6 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Homeodomain-like superfamily protein
Curated Summary
Encodes a MYB-like transcription factor similar to CIRCADIAN CLOCK-ASSOCIATED1 (CCA1) and ELONGATED HYPOCOTYL (LHY). Involved in the regulation of circadian clock by modulating the pattern of histone 3 (H3) acetylation.
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Identifiers

Identifier Name
aliasREVEILLE 8
aliasLHY-CCA1-LIKE5
aliasRVE8
aliasLCL5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355RCA, TASGene Ontologyregulation of transcription, DNA-dependent1 2
GO:0009651IEP, RCAGene Ontologyresponse to salt stress1 2
GO:0009723IEP, RCAGene Ontologyresponse to ethylene1 2
GO:0009733IEP, RCAGene Ontologyresponse to auxin1 2
GO:0009737IEP, RCAGene Ontologyresponse to abscisic acid1 2
GO:0009739IEP, RCAGene Ontologyresponse to gibberellin stimulus1 2
GO:0009751IEP, RCAGene Ontologyresponse to salicylic acid1 2
GO:0009753IEP, RCAGene Ontologyresponse to jasmonic acid1 2
GO:0046686IEP, RCAGene Ontologyresponse to cadmium ion1 2
GO:0032922IMPGene Ontologycircadian regulation of gene expression1
GO:0043966IMPGene Ontologyhistone H3 acetylation1
GO:0048573IMPGene Ontologyphotoperiodism, flowering1
GO:0007623RCAGene Ontologycircadian rhythm1
GO:0048574RCAGene Ontologylong-day photoperiodism, flowering1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677ISS, IEAGene OntologyDNA binding1
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0003682IEAInterProchromatin binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009057Homeodomain-like
IPR017930Myb domain
IPR001005SANT/Myb domain
IPR006447Myb domain, plants

Mapman id Description
27.3.26RNA.regulation of transcription.MYB-related transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMYB-related
PlantTFDBMYB_related