Gene: AT3G08840 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G08840
Transcript Identifier
AT3G08840.2
Gene Type
Coding gene
Location
3 : 2679648-2686157 : negative

Family

Gene family
HOM03M004924
(20 genes in 16 species)
specific family

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Descriptions

Description
D-alanine--D-alanine ligase family
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Identifiers

Identifier Name

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006023IEAPLAZA Homologyaminoglycan biosynthetic processHOM03M004924
GO:0006024IEAPLAZA Homologyglycosaminoglycan biosynthetic processHOM03M004924
GO:0009252IEAPLAZA Homologypeptidoglycan biosynthetic processHOM03M004924

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008716ISS, IEAGene OntologyD-alanine-D-alanine ligase activity1
GO:0003824IEAInterProcatalytic activity
GO:0005524IEAInterProATP binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm1
GO:0009507IDAGene Ontologychloroplast1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013816ATP-grasp fold, subdomain 2
IPR011127D-alanine--D-alanine ligase, N-terminal domain
IPR016185Pre-ATP-grasp domain
IPR013815ATP-grasp fold, subdomain 1
IPR011095D-alanine--D-alanine ligase, C-terminal
IPR000291D-alanine--D-alanine ligase/VANA/B/C, conserved site
IPR011761ATP-grasp fold

Mapman id Description
35.1not assigned.no ontology
No SignalP domains detected for this gene.