Gene: AT3G06400 (Arabidopsis thaliana)

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Gene Identifier
AT3G06400
Transcript Identifier
AT3G06400.3
Gene Type
Coding gene
Location
3 : 1941066-1946700 : positive

Family

Gene family
HOM03M000104
(463 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
chromatin-remodeling protein 11
Curated Summary
Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature.
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Identifiers

Identifier Name
aliasCHR11
aliaschromatin-remodeling protein 11
uniprotQ8RWY3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009553IMPGene Ontologyembryo sac development1
GO:0016049IMPGene Ontologycell growth1
GO:0008284RCAGene Ontologypositive regulation of cell proliferation1
GO:0009630RCAGene Ontologygravitropism1
GO:0010228IGIGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0043044IEAUniProtATP-dependent chromatin remodeling1 2
GO:0006338IEAInterProchromatin remodeling

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008094ISSGene OntologyDNA-dependent ATPase activity1
GO:0005515IPIGene Ontologyprotein binding1
GO:0005524IEAUniProtATP binding1 2
GO:0003682IEAUniProtchromatin binding1 2
GO:0003677IEAUniProtDNA binding1 2
GO:0004386IEAUniProthelicase activity1 2
GO:0031491IEAInterPronucleosome binding
GO:0016818IEAInterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676IEAInterPronucleic acid binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000104
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000104
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000104
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000104
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000104
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000104
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000104
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000104
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000104
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000104
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000104
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000104
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000104
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000104

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, IDA, ISMUniProtnucleus1 2 3 4
GO:0005829IDAGene Ontologycytosol1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000330SNF2-related
IPR015195SLIDE domain
IPR001650Helicase, C-terminal
IPR015194ISWI HAND domain
IPR001005SANT/Myb domain
IPR017884SANT domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR009057Homeodomain-like

Mapman id Description
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSNF2