PLAZA 3.0 Monocots gene overview : AT2G47450

Gene: AT2G47450 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G47450
Transcript Identifier: AT2G47450.1
Gene Type: Coding gene
Location: 2 : 19472781-19473902 : positive

Family

Gene family: HOM03M005542
(18 genes in 14 species)
specific family

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Descriptions

Description: chloroplast signal recognition particle component (CAO)

Curated Summary: A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.

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Identifiers

Identifier	Name
alias	CPSRP43
alias	CAO
alias	CHAOS
alias	CHLOROPLAST SIGNAL RECOGNITION PARTICLE 43
uniprot	O22265

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009644	IEP, RCA,	UniProt	response to high light intensity	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17
GO:0009637	RCA	Gene Ontology	response to blue light	1
GO:0009744	RCA	Gene Ontology	response to sucrose	1
GO:0010114	RCA	Gene Ontology	response to red light	1
GO:0010155	RCA	Gene Ontology	regulation of proton transport	1
GO:0010218	RCA	Gene Ontology	response to far red light	1
GO:0019344	RCA	Gene Ontology	cysteine biosynthetic process	1
GO:0046777	RCA	Gene Ontology	protein autophosphorylation	1
GO:0045038	TAS	UniProt	protein import into chloroplast thylakoid membrane	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IPI, IEA	Gene Ontology	protein binding	1
GO:0042802	IPI	Gene Ontology	identical protein binding	1
GO:0046872	IEA	UniProt	metal ion binding	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009941	IDA	UniProt	chloroplast envelope	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0009507	IDA	Gene Ontology	chloroplast	1
GO:0009535	IDA	UniProt	chloroplast thylakoid membrane	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0080085	IMP	UniProt	signal recognition particle, chloroplast targeting	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
GO:0009570	IEA	UniProt	chloroplast stroma	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15
GO:0005786	IEA	UniProt	signal recognition particle, endoplasmic reticulum targeting	1 2 3 4 5 6 7 8 9 10 11 12 13 14 15

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002110	Ankyrin repeat
IPR016197	Chromo domain-like
IPR023780	Chromo domain
IPR020683	Ankyrin repeat-containing domain
IPR000953	Chromo domain/shadow

Mapman id	Description
28.1	DNA.synthesis/chromatin structure

No SignalP domains detected for this gene.