Gene: AT2G46770 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT2G46770
- Transcript Identifier
- AT2G46770.1
- Gene Type
- Coding gene
- Location
- 2 : 19220917-19222822 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Block duplicate
Descriptions
- Description
-
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
- Curated Summary
-
NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. NST1 promoter was detected in various tissues in which lignified secondary walls develop.
Identifiers
Identifier | Name |
---|---|
alias | Arabidopsis NAC domain containing protein 43 |
alias | NST1 |
alias | NAC SECONDARY WALL THICKENING PROMOTING FACTOR1 |
alias | ANAC043 |
uniprot | Q84WP6 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0007275 | ISS | Gene Ontology | multicellular organismal development | 1 |
GO:0009793 | NAS | Gene Ontology | embryo development ending in seed dormancy | 1 |
GO:0009834 | IMP, IGI | UniProt | secondary cell wall biogenesis | 1 2 3 4 5 6 7 8 |
GO:0009901 | IGI | UniProt | anther dehiscence | 1 2 3 4 5 6 7 |
GO:0009809 | IGI | UniProt | lignin biosynthetic process | 1 2 3 4 5 6 7 |
GO:0010047 | IMP | UniProt | fruit dehiscence | 1 2 3 4 5 6 7 |
GO:0045893 | IDA | UniProt | positive regulation of transcription, DNA-dependent | 1 2 3 4 5 6 7 |
GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 3 4 5 6 |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-dependent | |
GO:0010468 | IEA | PLAZA Homology | regulation of gene expression | HOM03M000023 |
GO:0010467 | IEA | PLAZA Homology | gene expression | HOM03M000023 |
GO:0006807 | IEA | PLAZA Homology | nitrogen compound metabolic process | HOM03M000023 |
GO:1901576 | IEA | PLAZA Homology | organic substance biosynthetic process | HOM03M000023 |
GO:0006725 | IEA | PLAZA Homology | cellular aromatic compound metabolic process | HOM03M000023 |
GO:0051252 | IEA | PLAZA Homology | regulation of RNA metabolic process | HOM03M000023 |
GO:0051171 | IEA | PLAZA Homology | regulation of nitrogen compound metabolic process | HOM03M000023 |
GO:0090304 | IEA | PLAZA Homology | nucleic acid metabolic process | HOM03M000023 |
GO:0044260 | IEA | PLAZA Homology | cellular macromolecule metabolic process | HOM03M000023 |
GO:0019222 | IEA | PLAZA Homology | regulation of metabolic process | HOM03M000023 |
GO:0080090 | IEA | PLAZA Homology | regulation of primary metabolic process | HOM03M000023 |
GO:0034641 | IEA | PLAZA Homology | cellular nitrogen compound metabolic process | HOM03M000023 |
GO:0019219 | IEA | PLAZA Homology | regulation of nucleobase-containing compound metabolic process | HOM03M000023 |
GO:0034645 | IEA | PLAZA Homology | cellular macromolecule biosynthetic process | HOM03M000023 |
GO:0050789 | IEA | PLAZA Homology | regulation of biological process | HOM03M000023 |
GO:0009889 | IEA | PLAZA Homology | regulation of biosynthetic process | HOM03M000023 |
GO:2001141 | IEA | PLAZA Homology | regulation of RNA biosynthetic process | HOM03M000023 |
GO:0018130 | IEA | PLAZA Homology | heterocycle biosynthetic process | HOM03M000023 |
GO:0043170 | IEA | PLAZA Homology | macromolecule metabolic process | HOM03M000023 |
GO:0044237 | IEA | PLAZA Homology | cellular metabolic process | HOM03M000023 |
GO:0019438 | IEA | PLAZA Homology | aromatic compound biosynthetic process | HOM03M000023 |
GO:0044238 | IEA | PLAZA Homology | primary metabolic process | HOM03M000023 |
GO:0046483 | IEA | PLAZA Homology | heterocycle metabolic process | HOM03M000023 |
GO:0009058 | IEA | PLAZA Homology | biosynthetic process | HOM03M000023 |
GO:0016070 | IEA | PLAZA Homology | RNA metabolic process | HOM03M000023 |
GO:0009987 | IEA | PLAZA Homology | cellular process | HOM03M000023 |
GO:0009059 | IEA | PLAZA Homology | macromolecule biosynthetic process | HOM03M000023 |
GO:0044271 | IEA | PLAZA Homology | cellular nitrogen compound biosynthetic process | HOM03M000023 |
GO:0065007 | IEA | PLAZA Homology | biological regulation | HOM03M000023 |
GO:0010556 | IEA | PLAZA Homology | regulation of macromolecule biosynthetic process | HOM03M000023 |
GO:0060255 | IEA | PLAZA Homology | regulation of macromolecule metabolic process | HOM03M000023 |
GO:2000112 | IEA | PLAZA Homology | regulation of cellular macromolecule biosynthetic process | HOM03M000023 |
GO:0031323 | IEA | PLAZA Homology | regulation of cellular metabolic process | HOM03M000023 |
GO:1901360 | IEA | PLAZA Homology | organic cyclic compound metabolic process | HOM03M000023 |
GO:0031326 | IEA | PLAZA Homology | regulation of cellular biosynthetic process | HOM03M000023 |
GO:0006139 | IEA | PLAZA Homology | nucleobase-containing compound metabolic process | HOM03M000023 |
GO:1901362 | IEA | PLAZA Homology | organic cyclic compound biosynthetic process | HOM03M000023 |
GO:0034654 | IEA | PLAZA Homology | nucleobase-containing compound biosynthetic process | HOM03M000023 |
GO:0050794 | IEA | PLAZA Homology | regulation of cellular process | HOM03M000023 |
GO:0032774 | IEA | PLAZA Homology | RNA biosynthetic process | HOM03M000023 |
GO:0008152 | IEA | PLAZA Homology | metabolic process | HOM03M000023 |
GO:0071704 | IEA | PLAZA Homology | organic substance metabolic process | HOM03M000023 |
GO:0044249 | IEA | PLAZA Homology | cellular biosynthetic process | HOM03M000023 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003700 | ISS | UniProt | sequence-specific DNA binding transcription factor activity | 1 2 3 4 5 6 7 |
GO:0003677 | IEA | UniProt | DNA binding | 1 2 3 4 5 6 |
GO:0097159 | IEA | PLAZA Homology | organic cyclic compound binding | HOM03M000023 |
GO:0003676 | IEA | PLAZA Homology | nucleic acid binding | HOM03M000023 |
GO:0005488 | IEA | PLAZA Homology | binding | HOM03M000023 |
GO:1901363 | IEA | PLAZA Homology | heterocyclic compound binding | HOM03M000023 |
Cellular Component
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
33.99 | development.unspecified |
No SignalP domains detected for this gene.