Gene: AT2G45660 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G45660
Transcript Identifier
AT2G45660.1
Gene Type
Coding gene
Location
2 : 18807799-18810193 : negative

Family

Gene family
HOM03M000042
(909 genes in 16 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
AGAMOUS-like 20
Curated Summary
Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.
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Identifiers

Identifier Name
aliasAGAMOUS-like 20
aliasSUPPRESSOR OF OVEREXPRESSION OF CO 1
aliasAGL20
aliasATSOC1
aliasSOC1
uniprotO64645

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009911IMPUniProtpositive regulation of flower development1 2 3 4 5 6 7 8 9 10 11
GO:0009908TASUniProtflower development1 2 3 4 5 6 7 8 9 10 11
GO:0009409IEPUniProtresponse to cold1 2 3 4 5 6 7 8 9 10 11
GO:0045893IEPUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10 11
GO:0000060IDAUniProtprotein import into nucleus, translocation1 2 3 4 5 6 7 8 9 10 11
GO:0009739IEPUniProtresponse to gibberellin stimulus1 2 3 4 5 6 7 8 9 10 11
GO:0010077IGIUniProtmaintenance of inflorescence meristem identity1 2 3 4 5 6 7 8 9 10 11
GO:0010048RCAGene Ontologyvernalization response1
GO:0043481RCAGene Ontologyanthocyanin accumulation in tissues in response to UV light1
GO:0048440RCAGene Ontologycarpel development1
GO:0048481RCAGene Ontologyovule development1
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000042
GO:0010467IEAPLAZA Homologygene expressionHOM03M000042
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000042
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000042
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000042
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000042
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000042
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000042
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000042
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000042
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000042
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000042
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000042
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000042
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000042
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000042
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000042
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000042
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000042
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000042
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000042
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000042
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000042
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000042
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000042
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000042
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000042
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000042
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000042
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000042
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000042
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000042
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000042
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000042
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000042
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000042
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000042

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, TASIEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12
GO:0005515IPIGene Ontologyprotein binding1
GO:0008134IPIGene Ontologytranscription factor binding1
GO:0003677IEAUniProtDNA binding1 2 3 4 5 6 7 8 9 10
GO:0046983IEAInterProprotein dimerization activity
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000042
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000042
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000042
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000042

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IDA, ISMIEA, UniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12
GO:0005737IDAUniProtcytoplasm1 2 3 4 5 6 7 8 9 10 11
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03M000042
GO:0005622IEAPLAZA HomologyintracellularHOM03M000042
GO:0043226IEAPLAZA HomologyorganelleHOM03M000042
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03M000042
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03M000042
GO:0044464IEAPLAZA Homologycell partHOM03M000042
GO:0044424IEAPLAZA Homologyintracellular partHOM03M000042
GO:0005623IEAPLAZA HomologycellHOM03M000042

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002487Transcription factor, K-box
IPR002100Transcription factor, MADS-box

Mapman id Description
27.3.24RNA.regulation of transcription.MADS box transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMADS
PlantTFDBMIKC