Gene: AT2G41850 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G41850
Transcript Identifier
AT2G41850.1
Gene Type
Coding gene
Location
2 : 17461918-17464059 : negative

Family

Gene family
HOM03M000089
(508 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
polygalacturonase abscission zone A. thaliana
Curated Summary
ADPG2.
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Identifiers

Identifier Name
aliasADPG2
aliaspolygalacturonase abscission zone A. thaliana
aliasPGAZAT
aliasARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2
uniprotQ8RY29

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEA, ISSUniProtcarbohydrate metabolic process1 2 3 4 5 6 7
GO:0009830TAS, RCAUniProtcell wall modification involved in abscission1 2 3 4 5 6 7 8
GO:0009901IMPUniProtanther dehiscence1 2 3 4 5 6 7
GO:0010047IMPUniProtfruit dehiscence1 2 3 4 5 6 7
GO:0010227IMPUniProtfloral organ abscission1 2 3 4 5 6 7
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000089

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650IDA, ISSIEA, UniProtpolygalacturonase activity1 2 3 4 5 6 7 8
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000089
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03M000089
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03M000089

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576IEA, ISMUniProtextracellular region1 2 3 4 5 6 7
GO:0005618IEAUniProtcell wall1 2 3 4 5 6

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011050Pectin lyase fold/virulence factor
IPR006626Parallel beta-helix repeat
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28

Mapman id Description
10.6.3cell wall.degradation.pectate lyases and polygalacturonases
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network