PLAZA 3.0 Monocots gene overview : AT2G41680

Gene: AT2G41680 (Arabidopsis thaliana)

Overview

Gene Identifier: AT2G41680
Transcript Identifier: AT2G41680.1
Gene Type: Coding gene
Location: 2 : 17376349-17379028 : negative

Family

Gene family: HOM03M001473
(52 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description: NADPH-dependent thioredoxin reductase C

Curated Summary: Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.

Show more...

Identifiers

Identifier	Name
alias	NADPH-dependent thioredoxin reductase C
alias	NTRC
uniprot	O22229

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0043085	IDA	Gene Ontology	positive regulation of catalytic activity	1
GO:0045454	IDA, IEA,	UniProt	cell redox homeostasis	1 2 3 4 5 6
GO:0042744	IMP, RCA,	UniProt	hydrogen peroxide catabolic process	1 2 3 4 5 6 7
GO:0010380	IMP	UniProt	regulation of chlorophyll biosynthetic process	1 2 3 4 5 6
GO:0010581	IMP	UniProt	regulation of starch biosynthetic process	1 2 3 4 5 6
GO:0010027	RCA	Gene Ontology	thylakoid membrane organization	1
GO:0016117	RCA	Gene Ontology	carotenoid biosynthetic process	1
GO:0019288	RCA	Gene Ontology	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1
GO:0046686	RCA	Gene Ontology	response to cadmium ion	1
GO:0019430	IEA	UniProt	removal of superoxide radicals	1 2 3 4 5
GO:0055114	IEA	InterPro	oxidation-reduction process
GO:0071451	IEA	PLAZA Homology	cellular response to superoxide	HOM03M001473

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004791	IDA, IMP, ISSIEA,	UniProt	thioredoxin-disulfide reductase activity	1 2 3 4 5 6 7 8
GO:0005515	IPI	Gene Ontology	protein binding	1
GO:0008047	IDA	UniProt	enzyme activator activity	1 2 3 4 5 6
GO:0016671	IDA	UniProt	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1 2 3 4 5 6
GO:0050660	IEA	UniProt	flavin adenine dinucleotide binding	1 2 3 4 5
GO:0016491	IEA	InterPro	oxidoreductase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	IDA, ISM	Gene Ontology	chloroplast	1 2
GO:0009570	IDA	UniProt	chloroplast stroma	1 2 3 4 5 6
GO:0005737	IEA	InterPro	cytoplasm

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013027	FAD-dependent pyridine nucleotide-disulphide oxidoreductase
IPR001327	Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
IPR008255	Pyridine nucleotide-disulphide oxidoreductase, class-II, active site
IPR023753	Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
IPR012336	Thioredoxin-like fold
IPR000103	Pyridine nucleotide-disulphide oxidoreductase, class-II
IPR013766	Thioredoxin domain
IPR005982	Thioredoxin reductase
IPR017937	Thioredoxin, conserved site

Mapman id	Description
21.1	redox.thioredoxin

No SignalP domains detected for this gene.