Gene: AT2G40220 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G40220
Transcript Identifier
AT2G40220.1
Gene Type
Coding gene
Location
2 : 16796599-16797585 : negative

Family

Gene family
HOM03M000014
(1785 genes in 16 species)
specific family

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Descriptions

Description
Integrase-type DNA-binding superfamily protein
Curated Summary
Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.
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Identifiers

Identifier Name
aliasGLUCOSE INSENSITIVE 6
aliasIMPAIRED SUCROSE INDUCTION 3
aliasGIN6
aliasSAN5
aliasSALOBRENO 5
aliasABI4
aliasSUCROSE UNCOUPLED 6
aliasABA INSENSITIVE 4
aliasSUGAR-INSENSITIVE 5
aliasSUN6
aliasSIS5
aliasISI3
aliasATABI4
uniprotA0MES8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISS, TAS, IEAGene Ontologyregulation of transcription, DNA-dependent1 2
GO:0009747NASGene Ontologyhexokinase-dependent signaling1
GO:0006970IMPUniProtresponse to osmotic stress1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0009738IMPUniProtabscisic acid-activated signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0009749IMPUniProtresponse to glucose1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0010896IMPUniProtregulation of triglyceride catabolic process1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0010182TAS, RCAUniProtsugar mediated signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31
GO:0009414IMPUniProtresponse to water deprivation1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0005983NASUniProtstarch catabolic process1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0010353IMPUniProtresponse to trehalose1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0031930IDA, IMP, UniProtmitochondria-nucleus signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31
GO:0045893IDAUniProtpositive regulation of transcription, DNA-dependent1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0032880IDAUniProtregulation of protein localization1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0048527IMPUniProtlateral root development1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0010449IMPUniProtroot meristem growth1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0009640RCAGene Ontologyphotomorphogenesis1
GO:0009737RCAGene Ontologyresponse to abscisic acid1
GO:0009793RCAGene Ontologyembryo development ending in seed dormancy1
GO:0009845RCAGene Ontologyseed germination1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0009933RCAGene Ontologymeristem structural organization1
GO:0010162RCAGene Ontologyseed dormancy process1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0016567RCAGene Ontologyprotein ubiquitination1
GO:0019915RCAGene Ontologylipid storage1
GO:0050826RCAGene Ontologyresponse to freezing1
GO:0009744IEPUniProtresponse to sucrose1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0048316IMPUniProtseed development1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0006952IEAUniProtdefense response1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
GO:0009873IEAUniProtethylene mediated signaling pathway1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000014
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000014
GO:0010467IEAPLAZA Homologygene expressionHOM03M000014
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000014
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000014
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000014
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000014
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000014
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000014
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000014
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000014
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000014
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000014
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000014
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03M000014
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000014
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000014
GO:0009987IEAPLAZA Homologycellular processHOM03M000014
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000014
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000014
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000014
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000014
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000014
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000014
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000014
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000014
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000014
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000014
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03M000014
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000014
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000014
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000014
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000014
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000014
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000014
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000014
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000014
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000014
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000014
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000014
GO:0008152IEAPLAZA Homologymetabolic processHOM03M000014
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03M000014
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000014

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IDA, ISS, IEAGene OntologyDNA binding1 2
GO:0003700ISS, TASIEA, UniProtsequence-specific DNA binding transcription factor activity1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31
GO:0043565IPIUniProtsequence-specific DNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0044212IDAUniProttranscription regulatory region DNA binding1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000014
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000014
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000014
GO:0005488IEAPLAZA HomologybindingHOM03M000014
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000014

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISM, ISSUniProtnucleus1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
27.3.3RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBAP2-EREBP
PlantTFDBERF