Gene: AT2G40100 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT2G40100
- Transcript Identifier
- AT2G40100.1
- Gene Type
- Coding gene
- Location
- 2 : 16745884-16747190 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
light harvesting complex photosystem II
- Curated Summary
-
Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II
Identifiers
Identifier | Name |
---|---|
alias | light harvesting complex photosystem II |
alias | LHCB4.3 |
uniprot | Q9S7W1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0015979 | ISS | Gene Ontology | photosynthesis | 1 |
GO:0009637 | IEP, RCA, | UniProt | response to blue light | 1 2 3 4 5 6 |
GO:0010114 | IEP, RCA, | UniProt | response to red light | 1 2 3 4 5 6 |
GO:0010218 | IEP, RCA, | UniProt | response to far red light | 1 2 3 4 5 6 |
GO:0006364 | RCA | Gene Ontology | rRNA processing | 1 |
GO:0009765 | IEA | UniProt | photosynthesis, light harvesting | 1 2 3 4 |
GO:0018298 | IEA | UniProt | protein-chromophore linkage | 1 2 3 4 |
GO:0006091 | IEA | PLAZA Homology | generation of precursor metabolites and energy | HOM03M000124 |
GO:0019684 | IEA | PLAZA Homology | photosynthesis, light reaction | HOM03M000124 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016168 | IEA, ISS | UniProt | chlorophyll binding | 1 2 3 4 5 |
GO:0046872 | IEA | UniProt | metal ion binding | 1 2 3 4 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0030076 | ISS | Gene Ontology | light-harvesting complex | 1 |
GO:0009535 | IDA | UniProt | chloroplast thylakoid membrane | 1 2 3 4 5 |
GO:0016021 | IEA | UniProt | integral to membrane | 1 2 3 4 |
GO:0009522 | IEA | UniProt | photosystem I | 1 2 3 4 |
GO:0009523 | IEA | UniProt | photosystem II | 1 2 3 4 |
GO:0016020 | IEA | InterPro | membrane |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
1.1.1.1 | PS.lightreaction.photosystem II.LHC-II |
No SignalP domains detected for this gene.